Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2025 |
Symbol | |
ID | 8132969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2325929 |
End bp | 2326510 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644865315 |
Product | Na(+)-translocating NADH-quinone reductase subunit E |
Protein accession | YP_003017602 |
Protein GI | 253688412 |
COG category | [C] Energy production and conversion |
COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAT ACGCATTGCT CTTTGTTAGC ATCCTTCTGG TAAATAATTT CGTCTTAGTG AAGTTTCTTG GGCTGTGCCC CTTTATGGGC GTGTCCAAAA AGCTGGAGAC GGCGATTGGC ATGGGAATGG CGACCACGTT CGTCATGACC GTCGGCTCCA TGTTTTCCTG GCTGGTTAAC GAGTTTATTC TTGTTCCGCT CGATATTCTC TATCTACGCA CCATGGCGTT TATTCTGGTG CTCGCCGTTG TGGTGCAATT TTCCGAGATG TTCGTACGCA AAGTCAGCCC GGAGTTGTAT CGTCTGCTGG GGATTTTCCT GCCGCTGATT ACCACCAACT GTGCGGTGCT TGGTGTCGTC CTGCTTAACA TCAATCTATC GCACGGTTTC CTGAAATCGA CGATTTATGG CTTCGGCGGT GCTGCGGGCT TCTCGCTGGT CATGGTGCTT TTTGCCGCCA TTCGCGAACG CCTCGCCGTG TCGGATATTC CCGCGCCGTT CAGGGGTTCT TCTATCGCGC TGATCACCGC AGGCCTCATG TCATTGGCGT TTATGGGCTT TACCGGACTG GTGAAATTCT GA
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Protein sequence | MTEYALLFVS ILLVNNFVLV KFLGLCPFMG VSKKLETAIG MGMATTFVMT VGSMFSWLVN EFILVPLDIL YLRTMAFILV LAVVVQFSEM FVRKVSPELY RLLGIFLPLI TTNCAVLGVV LLNINLSHGF LKSTIYGFGG AAGFSLVMVL FAAIRERLAV SDIPAPFRGS SIALITAGLM SLAFMGFTGL VKF
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