Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_2021 |
Symbol | |
ID | 8132965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2321419 |
End bp | 2322048 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644865311 |
Product | electron transport complex protein RnfG |
Protein accession | YP_003017598 |
Protein GI | 253688408 |
COG category | [C] Energy production and conversion |
COG ID | [COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG |
TIGRFAM ID | [TIGR01947] electron transport complex, RnfABCDGE type, G subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAACAA CAATGCGTCG CCACGCGACA ACACTGGCCT TGTTTGCCGC CTTCACTACC GCAGTCACTG CCGTGGTGAA TATGCTGACG GAACCCACGA TCTCGCATCA GGCAATGTTG CAGCAAAAGA TGCTGTTGGA TCAGGTAGTT CCGGCAGAGC TATACAACAG TGACATGCAA AAAGAGTGTT ACGTTGTCAC TAATCCAGCG TTAGGATCGT CAGCGCCGCA CCGCGTGTTC ATCGCCCGTC AGGACGGTGA ACCTGTTGCC GCAGCACTAG AAAGTACCGC GCCAGATGGC TATTCTGGTG CTATTCGGCT GCTGGTTGGT GCCGATTTTC ATGGCAAGGT ACTCGGCGTT CGTGTGACCG AGCATCATGA AACGCCGGGG CTGGGTGATA AAATCGAAGT ACGCATCTCT GACTGGATCA CCCGATTCAG CGGACAAACG GTACAGAGCG AGCAAGATGC CCGCTGGGCA GTGAAGAAAG AAGGCGGAAT GTTTGATCAA TTTACCGGGG CCACGATTAC GCCACGCGCC GTCATTAATA GCGTAAAACG CAGCGCGCTT TACCTGCAAA CGTTGCCGTC ACAAATCAAC ACGCTATCCG CCTGTGGAGA GAACCAATGA
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Protein sequence | MITTMRRHAT TLALFAAFTT AVTAVVNMLT EPTISHQAML QQKMLLDQVV PAELYNSDMQ KECYVVTNPA LGSSAPHRVF IARQDGEPVA AALESTAPDG YSGAIRLLVG ADFHGKVLGV RVTEHHETPG LGDKIEVRIS DWITRFSGQT VQSEQDARWA VKKEGGMFDQ FTGATITPRA VINSVKRSAL YLQTLPSQIN TLSACGENQ
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