| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1904 |
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| Symbol | |
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| ID | 8132847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2197340 |
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| End bp | 2198629 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644865193 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003017481 |
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| Protein GI | 253688291 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.172949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CGATCCTACA CACGTTAATA GCTTCATCTC TGGCGTTAGT GGCAATGCCG
TCTTTAGCCG CTGATAATGT GGAATTGAGA ATGTCCTGGT GGGGCGGCAA CAGCCGTCAC
CAGCAGACGC TCAAAGCCAT TGAAGAGTTC CATAAGCAGC ATCCAAACAT CACCGTTAAA
GCGGAATACA CGGGCTGGGA TGGTCACCTG TCTCGTCTGA CAACGCAGAT TGCCGGTAAT
ACCGAGCCAG ATGTGATGCA GACCAACTGG AACTGGCTGC CGATTTTCTC TAAAAACGGC
GATGGTTTTT ACGATCTGAA CAAGGTTAAA GATTCTCTGG ATCTGACCCA GTTCGAATCC
AAAGAACTGC AAAACACCAC GGTCAACGGC AAACTGAACG GTATTCCGAT TTCCGTTACT
GCTCGCGTGT TCTATTTCAA CACCGAAAGC TGGAAAAAAG CCGGTCTGGA ATATCCGAAA
ACGTGGGACG AGCTGCTGAA CGCCGGTAAA GTGTTCAAAG AAAAACTGGG CGACCAATAC
TACCCTATCG TATTGGAACA CCAGGATTCT CTGGCACTGC TGAACTCTTA TATGGTTCAG
AAGTACAACA TTCCAGCGAT TGATGTAAAA GGTCAGAAAT TCGCCTATAC CGATGCGCAA
TGGACTGAAT TCTTTGGCAT GTATAAAAAA CTGATCGACA GCCATGTCAT GCCTGATGCT
AAGTACTATG CCTCTTTCGG CAAGAGCAAC ATGTATGAAA TGAAGCCATG GATCAACGGC
GAGTGGTCTG GTACTTACAT GTGGAACTCC ACCATTACCA AGTACTCTGA CAACCTGCAA
CCACCAGCAA AACTGGAATT GGGTAGCTAC CCAATGCTGC CAGGCGCGAA AGATGCCGGC
TTGTTCTTCA AACCTGCACA GATGCTGTCT ATCGGTAAAT CGACTAAGTA TCCTAAAGAG
TCTGCTCAGC TGATCAACTT CCTGCTGAAC AGTAAAGAAG GTGCTCAGGC TCTGGGTCTG
GAACGTGGTG TTCCGTTGAG TAAAGCAGCT GTTGCTCAGT TGACTGCTGA TGGCGTCATC
AAAGACGATG CACCAGCGGT TGCTGGGTTG AAACTGGCGT TGTCTCTGCC ACATGACGTT
GCCGTTTCTC CTTATTTCGA CGATCCACAA ATCGTTTCTC TGTTTGGTGA TACCATCCAG
TCTATCGATT ACGGTCAGAA ATCTGTGGAA GACGCAGCGA AATACTTCCA GCGTCAATCT
GAGCGTATTC TGAAACGCGC AATGAAATAA
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| Protein sequence | MKKAILHTLI ASSLALVAMP SLAADNVELR MSWWGGNSRH QQTLKAIEEF HKQHPNITVK
AEYTGWDGHL SRLTTQIAGN TEPDVMQTNW NWLPIFSKNG DGFYDLNKVK DSLDLTQFES
KELQNTTVNG KLNGIPISVT ARVFYFNTES WKKAGLEYPK TWDELLNAGK VFKEKLGDQY
YPIVLEHQDS LALLNSYMVQ KYNIPAIDVK GQKFAYTDAQ WTEFFGMYKK LIDSHVMPDA
KYYASFGKSN MYEMKPWING EWSGTYMWNS TITKYSDNLQ PPAKLELGSY PMLPGAKDAG
LFFKPAQMLS IGKSTKYPKE SAQLINFLLN SKEGAQALGL ERGVPLSKAA VAQLTADGVI
KDDAPAVAGL KLALSLPHDV AVSPYFDDPQ IVSLFGDTIQ SIDYGQKSVE DAAKYFQRQS
ERILKRAMK
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