Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1883 |
Symbol | |
ID | 8132826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2174754 |
End bp | 2175635 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644865172 |
Product | heat shock protein HtpX |
Protein accession | YP_003017460 |
Protein GI | 253688270 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000193864 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGTA TTGCGCTTTT CCTGATCACC AACCTGGCGG TGATGTTGGT TTTCGGGCTG GTACTCAGCC TGACGGGAAT TCAGTCCAGC AGTGTCCAGG GCTTAATGAT TATGGCTGGG CTGTTTGGCT TTGGCGGTGC GTTTGTTTCA CTGCTGATGT CTAAATGGAT GGCGTTACGG TCCGTTGGCG GTGAAGTCAT TGAACAACCA CGTAACGAAA CTGAACGTTG GCTGGTAGAA ACCGTTCGTA CACAGTCACA GCAGGCAGGG ATCGCGATGC CGCAAGTGGC AATCTACCAT GCGCCGGACA TCAATGCGTT TGCGACGGGC GCCCGCCGTG ATGCATCGCT GGTGGCAGTC AGTACCGGTT TGTTGCAAAA CATGAGCCGT GACGAAGCCG AAGCTGTTAT CGCGCATGAA ATCAGCCACA TCGCAAATGG CGACATGGTG ACCATGACGT TGGTTCAGGG GATAGTGAAC ACCTTCGTTA TCTTCGTTTC TCGTCTGATC GCTCAGGTCG TTTCCGGTTT CCTGTCCGGC AACCGTGATG AAGGTGAAAG CAGTAACGGC AACCCGCTGG TTTATTTTGC TGTCGCAACC GTGCTGGAAC TGGTGTTTGG TATTCTTGCC AGCATTATTA CCATGTGGTT CTCACGCTAC CGTGAATTCC ATGCGGATGC GGGTTCAGCC AAGCTGGTGG GGCGTGAGAA AATGATCGCT GCACTGCAGC GCCTGAAGAC CAGTTATGAA CCGCAAGAGG AAAGCAGCAT GATGGCTTTC TGTATCAACG GTAAATCAAA ATCCTTCAGC GAACTGTTTA TGTCTCACCC GCCGTTGGAT AAGCGCATTG AAGCGCTGCG CTCTGGTGAT TACCTGAAGT AA
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Protein sequence | MMRIALFLIT NLAVMLVFGL VLSLTGIQSS SVQGLMIMAG LFGFGGAFVS LLMSKWMALR SVGGEVIEQP RNETERWLVE TVRTQSQQAG IAMPQVAIYH APDINAFATG ARRDASLVAV STGLLQNMSR DEAEAVIAHE ISHIANGDMV TMTLVQGIVN TFVIFVSRLI AQVVSGFLSG NRDEGESSNG NPLVYFAVAT VLELVFGILA SIITMWFSRY REFHADAGSA KLVGREKMIA ALQRLKTSYE PQEESSMMAF CINGKSKSFS ELFMSHPPLD KRIEALRSGD YLK
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