| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1880 |
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| Symbol | |
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| ID | 8132823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2170909 |
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| End bp | 2172132 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644865169 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003017457 |
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| Protein GI | 253688267 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00890] Oxalate/Formate Antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0103294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCA AACCTGCTAA TCGGGGATTG ATTGTCCTCG GAACCATTAT CACCCAAATG
GGACTTGGCA CGATTTACAC CTGGAGTTTG TTCAATCAGC CGCTGGTGGA CAAATTTGGC
TGGACGCTGA GTTCAGTAGC AACAACGTTT TCCATCACCA GTTTCTGTCT GGCATTTGCC
ACGCTATTTG CTGGTAAGTT TCAGGAGCGT ATTGGTCTGC GTCGTTTGAC CATGGTTGCT
GGTATTGCGC TCGGGGCAGG GCTGATGGCG AGTGCGGTGA GCCCGTCGCT GACGCTGATT
TATCTGCTAA TGGGCGTGGT TGTTGGTTTT GCTGACGGTA CGGCTTACAT CACGACGCTG
TCCAACCTGA TCAAATGGTT CCCTAATCGC AAAGGATTAA TCGCGGGGAT TTCTGTTGGC
GCATTTGGTA CCGGAAGCCT GCTGTTCAAA TACGTAAACA GCTTTTTGAT TGCGGAGGTC
GGTGTGTCGG AAGCCTTTTT CTACTGGGGC GTTATCGTCA TGGCGATGAT TCTGGTCGGT
AGCTCACTGC TGAAAGAGCC TGCTGCGGTT CCGGTTCAAC AGACTGCGGT TCAGGGACAG
ACACGTGATT TCTCACTGGC TGAAATGTTG GCAACGAAAG AATCGTATTT ACTGTTTATT
ATCTTCTTCA CCGCATGCAT GAGTGGCCTG TATTTGATCG GTATTGTAAA AGATATCGGT
GTACAAATGG CCGGAATGGA TATGGCGATG GCGGCGAATG CCGTGTCGGC GATTGCGATT
TTTAATACCG TGGGACGTAT TGTGCTTGGC GCGCTTTCTG ACAGTGTCGG GCGTATGCGG
GTAATCAGCT TTACGCTGTT CGTGACGATT CTCGCGGTCT CCGTGATGAC ATTCCTGCCG
CTGAATCCGG TGCTGTTCTT TATCTGTGTC AGCGCGATTG CTTTCTGCTT TGGTGGCAAT
ATTACGGTAT TCCCTGCGAT TGTCGGCGAC TTCTTTGGCC TGAAAAATCA CAGCAAAAAC
TACGGCGTCA TTTATCAGGG ATTCGGCATT GGCGCGTTGT CTGGCTCGTT TATCGCCGCT
CAGCTCGGGG GCTTCCAGGC CACATTTATG GCAATCATCA TTATGTCTGT CGTTTCTCTG
CTGATTACCT TGTGGGTCAA ACCACCTAAA CATCAACCGG TCAGCACTTC ACTACGTGCG
GACATGGCAC ACGCACAAAG TTAA
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| Protein sequence | MNTKPANRGL IVLGTIITQM GLGTIYTWSL FNQPLVDKFG WTLSSVATTF SITSFCLAFA
TLFAGKFQER IGLRRLTMVA GIALGAGLMA SAVSPSLTLI YLLMGVVVGF ADGTAYITTL
SNLIKWFPNR KGLIAGISVG AFGTGSLLFK YVNSFLIAEV GVSEAFFYWG VIVMAMILVG
SSLLKEPAAV PVQQTAVQGQ TRDFSLAEML ATKESYLLFI IFFTACMSGL YLIGIVKDIG
VQMAGMDMAM AANAVSAIAI FNTVGRIVLG ALSDSVGRMR VISFTLFVTI LAVSVMTFLP
LNPVLFFICV SAIAFCFGGN ITVFPAIVGD FFGLKNHSKN YGVIYQGFGI GALSGSFIAA
QLGGFQATFM AIIIMSVVSL LITLWVKPPK HQPVSTSLRA DMAHAQS
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