| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1872 |
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| Symbol | |
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| ID | 8132815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2160434 |
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| End bp | 2161687 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644865161 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_003017449 |
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| Protein GI | 253688259 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.138329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGCA AAGTAGTTGT ACCGACAGAA GGTCAGAAAA TCACGGTTGA TGCTCAAGGC
AAACTGGTTG TTCCAAACAA TCCGGTTATT CCTTTTATCG AAGGTGACGG CATTGGTATC
GATGTAACGC CTGCCATGAT CAACGTCGTT GACGCCGCCG TGAAGAAAGC CTATCAGGGC
AAGCGCGCGA TTTCCTGGAT GGAAATCTAT ACCGGTGAAA AATCCACGCA GGTTTACGGT
AAAGATGTCT GGCTGCCAGA CGAAACGCTG GATTTGATCC GTGAATACCG TGTGGCGATT
AAGGGCCCGC TGACAACGCC AGTCGGCGGT GGTATTCGTT CTCTGAACGT TGCACTGCGC
CAACAGCTGG ATCTGTATGT TTGCCTGCGT CCGGTACGCT ACTACGAAGG TACACCTAGC
CCGGTTAAAC AGCCTGAGCT GACCGACATG GTGATCTTCC GTGAAAACGC CGAAGACATT
TATGCAGGTA TCGAGTGGAA AGCGGGTTCT GCTGAAGCAG ACAAAGTGAT CAAATTCCTG
CGTGAAGAAA TGGGCGTTAA CAAAATCCGT TTCCCTGAGC AGTGTGGTAT CGGCGTGAAG
CCGTGTTCCG AAGAAGGGAC CAAACGTCTG GTTCGCGCCG CAATCGAATA CGCGATCACC
AACGACCGTG ATTCTGTGAC GCTGGTGCAC AAAGGCAACA TCATGAAATT CACCGAAGGC
GCGTTCAAAG ACTGGGGATA CCAGTTGGCG CGTGAAGAAT TCGGCGGTGA GCTGATCGAT
GGCGGCCCAT GGGTGAAAAT CAAGAACCCG AACACCGGTA AAGAGATCGT AGTAAAAGAC
GTAATCGCCG ATGCATTCCT GCAACAAATC CTGCTGCGTC CTGCTGAATA CGATGTGATC
GCCTGTATGA ACCTGAACGG TGACTACATT TCTGATGCCT TGGCGGCACA GGTTGGCGGT
ATTGGTATTG CCCCTGGCGC GAACATCGGT GACGAATGTG CACTGTTTGA AGCAACGCAC
GGTACGGCAC CGAAATATGC CGGTCAGGAT AAAGTGAACC CAGGTTCCGT TATTCTGTCT
GCTGAAATGA TGCTGCGTCA CCTGCAATGG TTCGAAGCGG CTGACCTGAT TGTTAAGGGC
GTTGAAGGCG CGATCAAGAA CAAGACCGTG ACTTACGATT TCGAACGTCT GATGGAAGGC
GCTAAGCTGC GTAAATGTAG CGAGTTTGCT CAAGACATCA TCGACAACAT GTAA
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| Protein sequence | MESKVVVPTE GQKITVDAQG KLVVPNNPVI PFIEGDGIGI DVTPAMINVV DAAVKKAYQG
KRAISWMEIY TGEKSTQVYG KDVWLPDETL DLIREYRVAI KGPLTTPVGG GIRSLNVALR
QQLDLYVCLR PVRYYEGTPS PVKQPELTDM VIFRENAEDI YAGIEWKAGS AEADKVIKFL
REEMGVNKIR FPEQCGIGVK PCSEEGTKRL VRAAIEYAIT NDRDSVTLVH KGNIMKFTEG
AFKDWGYQLA REEFGGELID GGPWVKIKNP NTGKEIVVKD VIADAFLQQI LLRPAEYDVI
ACMNLNGDYI SDALAAQVGG IGIAPGANIG DECALFEATH GTAPKYAGQD KVNPGSVILS
AEMMLRHLQW FEAADLIVKG VEGAIKNKTV TYDFERLMEG AKLRKCSEFA QDIIDNM
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