| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1857 |
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| Symbol | |
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| ID | 8132800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2144479 |
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| End bp | 2145705 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644865146 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003017434 |
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| Protein GI | 253688244 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0541564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCTA CTGAAGTTAG CGAACAAGCA CCAACACAAT CAAATGTTGG GAGTGACGCT
GGAAAATTTT TGGTTAATAT CGTCGGTGCA ATCGCGTTAA CTCATGCATG CAATGATGTT
ATTCAGGCCA CGCTGCCATC AATTTACCCG ATGCTGAAAG AAAATTTCAC ATTGTCCTAC
GCACAAATTG GCATGATTGC GCTGGTTTAC CAAATTACGG CCTCCCTTCT TCAACCATGG
GTTGGTTTGT ATACCGACAA ACGTCCTAAA CCCTATCTTC TACCCGCAGG GATGGTTGTT
ACGTTTCTGG GTATCGGTTT GTTGGCAATA GCTAACAGCT TTACCCTGTT GCTCATCTCT
GCGGCGTTAG TTGGAGTGGG GTCGTCCACA TTTCACCCTG AGGCCTCACG TGTTGCCCGA
ATGGCTTCCG GCGGGAAGTT TGGTACCGCT CAGTCGGTTT TTCAGGTCGG GGGAAATGCG
GGTACTGCAT TCGGTCCTTT GATCGCCGCG CTTTTGATAC TTCCCCACGG GCAAATGTCA
GTCGCGTGGT TAATGATCAT CGCGTTTATT GCGATTGTTA TTTTGACTCG TATAAGCCGT
TGGACTATTG CTCACGGGCA TGCGCAGAGC AAAAAACATG ATAGCGTCCG CGGTGAAAGA
TTACCCCGAA ACAAGGTTAT TCTTGCCGTT GCAATTGTCA GTGTTTTGAT GCTGACGAAG
TTCACCTACA TCGCCTCCAT CAGCAATTAC TATACGTTTT ACCTGATTCA ACGTTTTGAT
ATTACCTTAC GTGATGCTCA GTTCTGCCTG TTTGCTTTCC TTGCAGCAGT AGCGATTGGG
ACGTTTGCTG GTGGGCCGGT TGGCGATCGT ATCGGCCGCA AGGCGGTGAT CTGGATATCA
TTTTTAGGGG TTATTCCCTT CGCTCCGATC CTGCCGCATG CAAATTTTTT CTGGACCGTC
ACGTTAACAC TCATCATTGG TTTTGTACTG TCTTCGGCGT TTGCTGCACT CGTGGTCTAT
GCGCAAGAAG TTGTGCCAGG AAGGACGGGG ATGGTTGCTG GAATTATGTT CGGCACCATG
TTTGGTGTGG GGGGAATTGC TGCTGCAAGT TTAGGTAAGT TGGCAGATAT CTATGGAATA
GTGTCGGTCT ATGATGCCTG CGGTTACCTT CCACTGCTTG GGCTAGCCAC TTTGCTGATG
CCGGATACGC GCAAAAAATC AAGATAG
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| Protein sequence | MSSTEVSEQA PTQSNVGSDA GKFLVNIVGA IALTHACNDV IQATLPSIYP MLKENFTLSY
AQIGMIALVY QITASLLQPW VGLYTDKRPK PYLLPAGMVV TFLGIGLLAI ANSFTLLLIS
AALVGVGSST FHPEASRVAR MASGGKFGTA QSVFQVGGNA GTAFGPLIAA LLILPHGQMS
VAWLMIIAFI AIVILTRISR WTIAHGHAQS KKHDSVRGER LPRNKVILAV AIVSVLMLTK
FTYIASISNY YTFYLIQRFD ITLRDAQFCL FAFLAAVAIG TFAGGPVGDR IGRKAVIWIS
FLGVIPFAPI LPHANFFWTV TLTLIIGFVL SSAFAALVVY AQEVVPGRTG MVAGIMFGTM
FGVGGIAAAS LGKLADIYGI VSVYDACGYL PLLGLATLLM PDTRKKSR
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