Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1840 |
Symbol | |
ID | 8132783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2127729 |
End bp | 2127941 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644865129 |
Product | cold-shock DNA-binding domain protein |
Protein accession | YP_003017417 |
Protein GI | 253688227 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAATA AAATGACTGG TTTAGTAAAA TGGTTTGACG CGGGTAAAGG TTTTGGTTTC ATTACTCCTG ACAACGGCAG CAAAGATGTA TTCGTACATT TCTCTGCTAT TCAGAGCAAC GATTTCAAAA CTCTGGACGA AGGCCAAAAG GTTGAGTTCA CCATTGAAAA TGGCCAGAAA GGCCCAGCAG CTGGCAACGT TGTTGCACTG TAA
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Protein sequence | MSNKMTGLVK WFDAGKGFGF ITPDNGSKDV FVHFSAIQSN DFKTLDEGQK VEFTIENGQK GPAAGNVVAL
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