| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1820 |
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| Symbol | ruvB |
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| ID | 8132763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2104782 |
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| End bp | 2105792 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865109 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_003017397 |
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| Protein GI | 253688207 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0486722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGAAG CCGATCGTTT AATTTCCGCT GACGCTATTC CTGAAGAAGA ATTTCTCGAC
CGAGCGATGC GGCCTAAGCT GCTGAACGAA TATGTGGGCC AGCCGCAGGT GCGTGAGCAG
ATGGAAATTT TCATTCAAGC CGCCCGCAAG CGGGGGGATG CGCTGGATCA TCTGCTGATT
TTTGGTCCTC CCGGTCTGGG TAAAACGACA TTGGCGAATA TTGTCGCTAA TGAGATGGGC
GTGAATATGC GTACAACGTC GGGTCCGGTG TTGGAAAAAG CGGGCGATCT TGCTGCGCTG
CTGACCAATC TCGAACCGCA TGATGTGCTG TTCATTGATG AAATCCATCG CCTCTCGCCC
GTAGTGGAAG AAGTGCTGTA CCCGGCGATG GAAGATTACC AACTGGATAT CATGATCGGC
GAAGGGCCTG CGGCTCGCTC GATTAAACTC GATCTGCCTC CTTTCACACT GATTGGCGCA
ACGACGCGTG CCGGGTCGTT AACCTCGCCG CTGCGCGATC GTTTTGGCAT TGTGCAACGT
CTGGAGTTTT ATAATGTGGC GGATTTGCAG TATATCGTTG GCCGCAGCGC ACAGTGTCTG
GGATTGGATC TGACGCCGGA AGGCTCCCTT GAAGTCGCCC GCCGCGCGCG GGGCACGCCG
CGCATTGCTA ATCGGCTATT GCGTCGGGTA CGCGATTTTT CCGAGGTTAA ATCGGAAGGG
GCGATTACCG GAGTCGTGGC AACGCAGGCG CTGGATATGC TGGCGGTGGA TACCGAAGGG
TTCGACTACA TGGACCGTAA GCTATTGTTG GCGATTATCG ATAAATTCAT GGGCGGCCCC
GTCGGGCTGG ACAATTTAGC GGCTGCCATT GGCGAAGAGC GTGAAACCAT TGAAGACGTG
CTGGAACCGT TTTTGATTCA GCAAGGGTTT ATTCAGCGTA CGCCGCGCGG TCGGATGGCG
ACGCAACATG CCTATAGGCA TTTTGGCTTA ACGCGCGAAG ATTTGGGCTA A
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| Protein sequence | MIEADRLISA DAIPEEEFLD RAMRPKLLNE YVGQPQVREQ MEIFIQAARK RGDALDHLLI
FGPPGLGKTT LANIVANEMG VNMRTTSGPV LEKAGDLAAL LTNLEPHDVL FIDEIHRLSP
VVEEVLYPAM EDYQLDIMIG EGPAARSIKL DLPPFTLIGA TTRAGSLTSP LRDRFGIVQR
LEFYNVADLQ YIVGRSAQCL GLDLTPEGSL EVARRARGTP RIANRLLRRV RDFSEVKSEG
AITGVVATQA LDMLAVDTEG FDYMDRKLLL AIIDKFMGGP VGLDNLAAAI GEERETIEDV
LEPFLIQQGF IQRTPRGRMA TQHAYRHFGL TREDLG
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