Gene PC1_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1816 
SymbolntpA 
ID8132759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2102270 
End bp2102713 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content53% 
IMG OID644865105 
ProductdATP pyrophosphohydrolase 
Protein accessionYP_003017393 
Protein GI253688203 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.825247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATACA AGCGACCTGT TTCGGTTCTG GTGGTGATCT ATGCCCGTGA CACCGGACGG 
GTGCTGATGT TGCAACGGCG TGACGATCCC GAATTCTGGC AGTCGGTAAC CGGCAGTATA 
GAAGAAGGGG AAAGCGCGCC GTATGCCGCA CAGCGTGAAG TCAAAGAAGA AGTGAACATT 
GATATATCCG CGGAAGCGTT ATCACTCTTT GATTGTCAGC GCTGTATTGA GTTTGAGCTA 
TTTGCTCATT TGAGACGTCG CTATGCGCCG GGGGTTACGC ACAATACCGA ACACTGGTTT 
TGTCTGGCGT TACCTGCTGA GCGCGAGGTG CAATTATCCG AGCATCTTGC CTACCAGTGG 
TTGGATGTGC CCCACGCGGC ACAGTTGACC AAGTCCTGGA GCAACCGGCA GGCGATTGAG 
GAATTTGTTA TTTATCCGGC CTGA
 
Protein sequence
MVYKRPVSVL VVIYARDTGR VLMLQRRDDP EFWQSVTGSI EEGESAPYAA QREVKEEVNI 
DISAEALSLF DCQRCIEFEL FAHLRRRYAP GVTHNTEHWF CLALPAEREV QLSEHLAYQW 
LDVPHAAQLT KSWSNRQAIE EFVIYPA