| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1787 |
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| Symbol | pepN |
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| ID | 8132729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2065738 |
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| End bp | 2068353 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865075 |
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| Product | aminopeptidase N |
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| Protein accession | YP_003017364 |
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| Protein GI | 253688174 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00859776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAC AGCCGCAAAT AAAATATCGC CATGACTACC GTGCACCGGA TTACACCATT
ACCGACATTG CACTGGATTT CGATCTCCAT GCCGAGAAAA CTCGGGTAAA AGCCGTTAGT
CAGGTGGTGT TGCAGGGGGA CGCTGGCGCG CCGTTGAAGC TTGATGGTGA AGGGTTAACG
CTGATTAGCC TGAGCGTTGA TGGACAACCG TGGGCACATT ATCAGCAACA GGACGATGGC
CTGATTCTGA CGCAATTGCC CGCGCGTTTT ACGCTCAGCA TCGAAACGGA CATCAATCCA
GCCGCCAATA GTGCACTGGA AGGGCTATAC CTCTCTGGCG AAGCGCTCTG TACGCAGTGT
GAGGCCGAAG GTTTCCGCCA CATTACCTAC TATCTCGACC GCCCGGATGT GCTGGCAAAA
TTCACCACGC GCATCACGGC GGATAAAGCA CGCTATCCTT ATTTACTCTC TAACGGCAAC
CGTATCGCGC AAGGCGAGCT GGAAGGCGGT CGCCATTGGA TTGAATGGCA GGATCCGTTC
CCGAAACCGG CTTATCTGTT CGCGCTGGTT GCCGGCGATT TTGATGTGCT TCAGGATCGC
TTCACGACAC GTTCTGGCCG TGATGTTGCT CTGGAGTTGT ATGTTGACCG TGGCAACCTC
GATCGCGCTG GCTGGGCGAT GACCTCGTTG CAAAATGCGA TGAAGTGGGA CGAAGAGCGT
TTCGGTCTGG AATACGATCT CGACATTTAT ATGATCGTCG CCGTTGATTT CTTCAATATG
GGGGCGATGG AGAATAAAGG GCTGAACGTA TTCAACTCTA AATACGTGCT GGCCAAAGCT
GAAACCGCGA CGGATAAAGA TTATCTGAAC ATTGAAGCGG TGATCGGCCA TGAATATTTC
CACAACTGGA CGGGTAACCG CGTCACTTGC CGCGACTGGT TCCAGCTTAG CCTGAAAGAA
GGGCTGACGG TGTTCCGCGA TCAGGAATTC AGTTCCGACC TGGGGTCGCG CCCAGTGAAC
CGTATCGATA ACGTACGTGT GATGCGCGGT GCGCAGTTTG CCGAAGATGC CAGCCCGATG
TCCCATCCGA TTCGTCCCGA TCAGGTGATC GAGATGAATA ACTTCTATAC GCTGACGGTC
TATGAAAAGG GATCGGAAGT GATCCGCATG ATGCACACCT TATTAGGTGA AGAGGGCTTC
CAGGCCGGCA TTCGTCTGTA TTTTGAACGT CACGATGGCA GCGCGGCGAC CTGTGATGAT
TTCGTGCAGG CGATGGAGGA CGCTTCCGGT GTCGATCTTA CCCAGTTCCG TCGTTGGTAT
AGCCAGTCGG GCACGCCGGT GCTGACCGTG CGTGATGATT ACGATCCGCA GACACAACAA
TATCTGCTGA GCGTGAGCCA GACGACGCCA GTCGGTGCCG ACAAACAACC CAAACTGCCA
CTGCACATTC CGCTGGATAT CGAACTGTAC GATCCGCAAG GGCAGGTGAT TCCGCTACAG
AAAGACGGCC AACTGCTGGC GTCGGTACTC AATGTGACCG AATCCGAACA GACGTTTATT
TTCGATCAGG TACCTTGCCG CCCAATTCCT TCTTTATTAC GTGAATTTTC TGCGCCAGTA
AAACTGAACT ATGCATGGAG CGATGAACAA CTGACGTTCC TGATGCGTCA TGCGAGTAAT
GCGTTCTCAC GTTGGGATGC GGCACAGAGC CTGTTGGCCA ACTATATCCG TCTGAACGTT
TCCCGCTACC AGCAGAAGCA GCCGCTTTCC GTGCCGATGC ATGTTGTCGA TGCTTTCCGT
GGCGTGTTGC TGGATGACAA ACTGGATCCG ATGTTGGCTT CTCAGATTCT GACATTGCCG
AGCGAAAACG AGATTGCTGA GCTGTTTGAT ATCATCGATC CGACGGCGAT CGCTGCCGTA
CGCGACAGCA TGACGCATAC GATGGCGAAA GAGATGGCGG ATGAGTGGCT GGCGGTATAC
CACGCGAATC AGGCGCCACA GTATCGCATC GAACATGCGG ATATGGGTAA ACGCGCGCTG
CGCAACGTCT GCCTGCATTA TCTGGCATTC AGCGATGAGG CGCAGGCGGA TAAACTGGTG
CAAGCGCAGT TCCGTCAGGC GGATAACATG ACGGATTCGC TGGCGGCGCT GTCGGCGGCA
GTTGAAGCGC AGTTGCCAGT GCGTGATGAG CTGCTGACGC AGTTTGATAA CCGTTGGCAT
CAGGATGGTT TGGTCATGGA TAAATGGTTT GTGCTGCAAG CCACCAGCCC GGCAGCCGAT
GTACTGACCC GCGTGCGTGA ACTGCTACAA CATCGTTCAT TCAGCCTGAA CAACCCTAAC
CGGCTGCGTT CGCTGGTGGG AGCGTTTGCG GCCGCTAATC CATCGGCTTT CCATGCCGAA
GACGGTAGCG GCTATCGTTT CCTGACGGAA ATTCTGAGCG ATCTGAACAC CCGCAATCCG
CAGGTCGCGG CACGGATGAT TGAACCGTTG ATCCGCCTGA AACGCTATGA TGCTAAACGT
CAGGCGCAAA TGCGTCAGGC ACTGGAGCAA CTGAAGACGT TGGAAAATCT ATCTGGCGAT
CTGTTCGAGA AGATCAGCAA GGCACTGCAA GACTAA
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| Protein sequence | MNQQPQIKYR HDYRAPDYTI TDIALDFDLH AEKTRVKAVS QVVLQGDAGA PLKLDGEGLT
LISLSVDGQP WAHYQQQDDG LILTQLPARF TLSIETDINP AANSALEGLY LSGEALCTQC
EAEGFRHITY YLDRPDVLAK FTTRITADKA RYPYLLSNGN RIAQGELEGG RHWIEWQDPF
PKPAYLFALV AGDFDVLQDR FTTRSGRDVA LELYVDRGNL DRAGWAMTSL QNAMKWDEER
FGLEYDLDIY MIVAVDFFNM GAMENKGLNV FNSKYVLAKA ETATDKDYLN IEAVIGHEYF
HNWTGNRVTC RDWFQLSLKE GLTVFRDQEF SSDLGSRPVN RIDNVRVMRG AQFAEDASPM
SHPIRPDQVI EMNNFYTLTV YEKGSEVIRM MHTLLGEEGF QAGIRLYFER HDGSAATCDD
FVQAMEDASG VDLTQFRRWY SQSGTPVLTV RDDYDPQTQQ YLLSVSQTTP VGADKQPKLP
LHIPLDIELY DPQGQVIPLQ KDGQLLASVL NVTESEQTFI FDQVPCRPIP SLLREFSAPV
KLNYAWSDEQ LTFLMRHASN AFSRWDAAQS LLANYIRLNV SRYQQKQPLS VPMHVVDAFR
GVLLDDKLDP MLASQILTLP SENEIAELFD IIDPTAIAAV RDSMTHTMAK EMADEWLAVY
HANQAPQYRI EHADMGKRAL RNVCLHYLAF SDEAQADKLV QAQFRQADNM TDSLAALSAA
VEAQLPVRDE LLTQFDNRWH QDGLVMDKWF VLQATSPAAD VLTRVRELLQ HRSFSLNNPN
RLRSLVGAFA AANPSAFHAE DGSGYRFLTE ILSDLNTRNP QVAARMIEPL IRLKRYDAKR
QAQMRQALEQ LKTLENLSGD LFEKISKALQ D
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