Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1765 |
Symbol | |
ID | 8132707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2036515 |
End bp | 2037522 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644865053 |
Product | transport system permease protein |
Protein accession | YP_003017342 |
Protein GI | 253688152 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4605] ABC-type enterochelin transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0506654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTTA ATGAGTTCAA AGTTGATACC CCCACTGCCA CTTCGTCTGT AGCGTGCAGC TCATCACCTT ATCGGCATTT ATGGTGGCTG AGTGCGGTGG CATTAGCGGC CATCGTGGTG TTCATGACCA TCAATCTGGG CGGTAACCTG CGCTACATCC TGATACATCG GGGCCAGATT TTATCCACGA TGGTACTGGT CGCGTTTGCT GCTAGTGTGT CAACCGTCCT GTTCCAGACG GTGACGAATA ACCGCATTCT CACGCCTTCT ATCATGGGGT TTGAGGCGCT GTTTATCTTG CTGCAAACAG CGGTGCTGTT CTTCTTTGGG GTACAAGGTA TTACGGCGGT TGGCGTGAGC GGCAAATTCA TCCTTGAAGC GTTGCTGTTG GTGCTGTTTT CCTTGTTACT CTATCGCAGT CTGTTTACCG GGAGTCACAG TAATCTACAT CTGGTTCTGC TGGTCGGGAT CATCTGTGGC ACCTTGTTTC GCAGTGCTTC CAGCCTGATG CAGCGGCTCC TGACTCCCGG TGAGTTTGCT GTTCTGCAAA GCAGAATGTT TGCCACCTTT ACGCGTGCAG CGCCGGAACT GATTGCGCTG TCTGCTGCGA TCATCTTGAT TATTGCCCTG TGCGTATGGC GATTGCGTTT CCAATTGGAC GTACTGGCGC TGGGGAAAAA TACAGCGATT AATCTAGGTA TCTCTTACAA GCGCCATGTA ACGCTAGTGC TGTTGCTAGT GTCAGTGCTC GTCGCTGTGT CGACGGCGTT AGTGGGCCCG TTAACCTTTT TAGGATTTAT GGTGGCGAAT TTAGCCTATC TGATTGCGGG TTCCAGCCAA CATCGCATTG TGCTGCCGAC GGCGTTTTTG CTTGGCATCA TCGCGTTAGT GGGGGGACAG TTAATTTTGG AACATCTGTT AGGCATGGCG GGAGCGCTTT CCGTGGTGCT CGAATTTATC GGTGGTTCGC TGTTTATTGT GTTGTTACTG AAAAAGGTTT CTGTGTGA
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Protein sequence | MSVNEFKVDT PTATSSVACS SSPYRHLWWL SAVALAAIVV FMTINLGGNL RYILIHRGQI LSTMVLVAFA ASVSTVLFQT VTNNRILTPS IMGFEALFIL LQTAVLFFFG VQGITAVGVS GKFILEALLL VLFSLLLYRS LFTGSHSNLH LVLLVGIICG TLFRSASSLM QRLLTPGEFA VLQSRMFATF TRAAPELIAL SAAIILIIAL CVWRLRFQLD VLALGKNTAI NLGISYKRHV TLVLLLVSVL VAVSTALVGP LTFLGFMVAN LAYLIAGSSQ HRIVLPTAFL LGIIALVGGQ LILEHLLGMA GALSVVLEFI GGSLFIVLLL KKVSV
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