Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1742 |
Symbol | |
ID | 8132684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2012640 |
End bp | 2013707 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865030 |
Product | imidazole glycerol-phosphate dehydratase/histidinol phosphatase |
Protein accession | YP_003017319 |
Protein GI | 253688129 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0131] Imidazoleglycerol-phosphate dehydratase |
TIGRFAM ID | [TIGR01261] histidinol-phosphatase [TIGR01656] histidinol-phosphate phosphatase family domain [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.279219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGCCAGA AATACCTCTT TATCGACCGT GACGGAACAT TGATTGCTGA ACCGCCTGAG GATTTTCAGG TTGACCGTCT GGATAAACTG GCGCTGGAAC CAGATGTCAT TCCCTCGCTG CTGGCGCTGC AAAAAGCTGG CTATACGCTG GTGATGATCA CAAATCAGGA TGGACTGGGA ACCGAAAGCT TTCCGCAAGA AACCTTCGAT CCACCGCACA ACCTGATGAT GCAGATTCTG ACATCGCAGG GCATCCAGTT TGAACAAGTG CTGATTTGCC CACACTTGCC AGCGGATAAC TGCGCTTGCC GCAAACCCAG AACCGAACTG GTCACCAGCT ATTTGAATAA TGGCCTGATG GACGTGACAA ATAGCTACGT CATCGGCGAC CGCCAGACCG ATATCCAACT GGCGCAAAAC ATGGGCATTA CTGGCCTGCT CTACCAGCGC GGCGGGTTGA ACTGGCAAGC GATTACCAAC CAGTTAACCA AGCGTAATCG CCATGCCCAC GTTAACCGCG TTACGCGCGA AACCGCGATT GACGTGAACG TCTGGCTGGA TCAGGAAGGC GGCAGCAAAA TTAACACTGG CGTCGGCTTC TTCGATCACA TGCTGGATCA AATCGCCACC CACGGCGGCT TCCGCATGAA TATTGAAGTG AAAGGCGATC TGTACATTGA CGATCACCAC ACGGTGGAAG ATACCGGTCT GGCGCTGGGC GAAGCGTTGA ATAAAGCGCT GGGTGACAAA CGCGGTATTG GTCGCTTTGG CTTTGTCCTG CCAATGGATG AATGTCTGGC ACGCTGTGCG CTGGATATTT CCGGGCGTCC GCATCTGGAA TATAAGGCGG AGTTCAGCTA CCAGCGCGTG GGCGACCTGA GCACGGAAAT GGTCGAGCAC TTCTTCCGCT CGCTGTCTTA TTCCATGGCC TGTACGTTGC ACCTGAAAAC CAAGGGGCGT AACGATCATC ACCGTGTGGA AAGCCTGTTT AAAGTCTTCG GACGCACGCT GCGCCAGGCA ATTCGCGTCG AGGGTGATAC GCTGCCGAGC TCGAAAGGAG TGCTCTGA
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Protein sequence | MGQKYLFIDR DGTLIAEPPE DFQVDRLDKL ALEPDVIPSL LALQKAGYTL VMITNQDGLG TESFPQETFD PPHNLMMQIL TSQGIQFEQV LICPHLPADN CACRKPRTEL VTSYLNNGLM DVTNSYVIGD RQTDIQLAQN MGITGLLYQR GGLNWQAITN QLTKRNRHAH VNRVTRETAI DVNVWLDQEG GSKINTGVGF FDHMLDQIAT HGGFRMNIEV KGDLYIDDHH TVEDTGLALG EALNKALGDK RGIGRFGFVL PMDECLARCA LDISGRPHLE YKAEFSYQRV GDLSTEMVEH FFRSLSYSMA CTLHLKTKGR NDHHRVESLF KVFGRTLRQA IRVEGDTLPS SKGVL
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