Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1737 |
Symbol | |
ID | 8132679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2008010 |
End bp | 2009866 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644865025 |
Product | Amidohydrolase 3 |
Protein accession | YP_003017314 |
Protein GI | 253688124 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.493619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAG CGTGTGGTCA TTCCGGCGGC ATAAGCTGTT CCTGTTGCAG CCCTCTGTGG AAATCATTTC TCCCTAAAAC GTCAATTGAT ATTCCGAAAG AAGAAAATAG TCTGTTTACC GAAACGAAAT TATTCCGTTC TGCACCAAAT AAAGATGGTA GTCCTGGAAA AGCGATTCTG ACGCTGGAGG ATGGGCAGGA CGTGGCGGTT GAAGCGATGG GGATTCATGA TGGACTCGTG GTTGCAACGG GTTCATACCA AGATGTGAAG GCCAAAATGC CGAAAAACAC ATCGGAGCAC CTATTATCAG GTAAGCAAGC ACTGTTGCCT GGCCTGATTG AACCGCATGT ACATATCATT AATACGGCGA TGTTATCTGC TATCGGCAAT GACGTTAGCC CGTTTGAAGA ACAGATATTA CGCAAAGATT ATAATAGAGA TTGGGTGACA TCCAGCCTGG CTACGAAGGT GGCGGCAAAG TCGGATTCGG ACTGGCTTAT TGGCTTTGGT GCAGACCCTT CCTTGTTTAT TGGTGGAGAG AAGGAATTCA ATGCCACCAT TCTTGATGAA CATGTGACGG ATAAACGACC CGTTTTTGTC ATCAATGCCT CAATGCACAT TGCCTATATC AATACCTGTG CCATTAAACT TGTCAAAACT AAAGGCGTTG ATGCTCCATC GGACGGCATT CTGAACGAAA TCACGGGTAT AAAGCCTGTT GTGGACGTCA TTACCAGTAG TTACTCCCAA ACAGAATTGG CGGCGAAGTT AGTTGCCGCA GTGCATCATT TGTTTGGTGT GGCGAGTCAG CGCGGTGTGA CTTATATGCT TGATGCGGGC GTTGAACCCA AAAGCGAGCA GTCTGCTTTT GATCAAGTGA GCTTGCTGGA TAAATGGGCG CATCTGCCGG GCTGCCCGGT GCGGATTGGT GGCGCGCTGC TCGTGACGAG TGATGGTGAT TTCAAGAGTC ACGTGGTCGA TTCTTACTCC CCAGGCTACG GTGATGAACA TTTTCACTTA CCGTATATCA AGATTATTTC GGATGGATCT AATCAAGGGC TGACGGGGTA TCAGTCCAAG CCGTATTGTT GTAACAGCCG CTATGAAAAA ACGCCGAGTG AAACAAATGC TGGTGCTTTC AACTTCGATC CTCTCACGGA CATCAATACG TTGGTGAGTA GCGTTGTGCA ACATAAATGG CCGTTGATGA TTCATACGAA TGGCGATGAG GCCATTAGTC TGACATTAGC GTCATTTCAA GAGGCTGGCG TGACATCTGA TACCTATGAA CAGCGCCGCG ATCGTCTGGA ACATGCATCC CTGCTGAGTG ATGATCATCT GTCTGAAATG GTGTCATGTG GTATTTCGCC GAGTTTCTTG ATTGGTCATG TGGGGTATTG GGGCTGGGCA TTTCAGCAAA CCATATTGGG AGAAGGCCGG GCTAGTCACC TCGATCGTTG CCAGACCGCT CTTAATCATG GGATGAGGAT TACGCTACAC AGCGATAACG GTGTTACACC GCTTGGTCCG CTGCGCATGA TGGAACAGGC TATTTCACGG GTGATGGAAG GTGCACCTCA ACAGGCGGCT CCTGCTGTGC TGTGTGAGCA AGAACGGATT TCCCGTTTTG CTGCACTGAA AGCCACAACC TATGATGCTG CCTGGCAATG TCATGCAGAT CAGTGGGTCG GTTCGCTCGT TGCAGGTAAA TGTGCTGATT TTGTTATTTT GGCGGATTCT CCGCTGACCT ATGACTCAGC AGACAAGAAT AATCCGGTCA AAGATATGCG TGATATCCCG GTTCTGGAAA CCTGGAAAGG AGGACGTAAA GTGCATTCAG GAACGGGGCA TTCTTAA
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Protein sequence | MSEACGHSGG ISCSCCSPLW KSFLPKTSID IPKEENSLFT ETKLFRSAPN KDGSPGKAIL TLEDGQDVAV EAMGIHDGLV VATGSYQDVK AKMPKNTSEH LLSGKQALLP GLIEPHVHII NTAMLSAIGN DVSPFEEQIL RKDYNRDWVT SSLATKVAAK SDSDWLIGFG ADPSLFIGGE KEFNATILDE HVTDKRPVFV INASMHIAYI NTCAIKLVKT KGVDAPSDGI LNEITGIKPV VDVITSSYSQ TELAAKLVAA VHHLFGVASQ RGVTYMLDAG VEPKSEQSAF DQVSLLDKWA HLPGCPVRIG GALLVTSDGD FKSHVVDSYS PGYGDEHFHL PYIKIISDGS NQGLTGYQSK PYCCNSRYEK TPSETNAGAF NFDPLTDINT LVSSVVQHKW PLMIHTNGDE AISLTLASFQ EAGVTSDTYE QRRDRLEHAS LLSDDHLSEM VSCGISPSFL IGHVGYWGWA FQQTILGEGR ASHLDRCQTA LNHGMRITLH SDNGVTPLGP LRMMEQAISR VMEGAPQQAA PAVLCEQERI SRFAALKATT YDAAWQCHAD QWVGSLVAGK CADFVILADS PLTYDSADKN NPVKDMRDIP VLETWKGGRK VHSGTGHS
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