Gene PC1_1735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1735 
SymbolrpsA 
ID8132677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2005658 
End bp2007331 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content50% 
IMG OID644865023 
Product30S ribosomal protein S1 
Protein accessionYP_003017312 
Protein GI253688122 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0109338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT CTTTTGCTCA ACTCTTTGAA GAATCCCTGA AAGAAATCGA AACCCGTCCT 
GGTTCCATCG TACGCGGTGT TGTTGTTGCT ATTGACAAAG ATGTCGTACT GGTTGACGCC
GGTCTGAAAT CTGAATCTGC CATTCCGGTA GAGCAATTCA AGAACGCACA GGGCGAACTG
GAAATTCAGG TTGGTGATGA AGTTGACGTT GCTCTGGACG CTATCGAAGA TGGCTTCGGT
GAAACGCTGC TTTCTCGCGA AAAAGCTAAA CGACATGAAG CATGGCTGAC GCTGGAAAAA
GCCTACGAAG AAGCTGCAAC TGTTACCGGT ATTATCAACG GTAAAGTTAA AGGCGGTTTC
ACTGTTGAGC TGAACGGCAT TCGTGCGTTC CTGCCAGGTT CTCTGGTAGA CGTTCGTCCG
GTTCGCGACA CGCTGCATCT GGAAGGCAAA GAGCTTGAGT TCAAAGTTAT CAAGCTGGAT
CAGAAACGCA ACAACGTTGT TGTTTCCCGC CGTGCAGTTA TCGAATCTGA AAACAGCGCT
GAGCGCGATC AACTGCTGGA AAACCTGCAG GAAGGCATGG AAGTTAAAGG TATCGTTAAG
AACCTTACTG ACTACGGTGC ATTCGTTGAT CTGGGCGGCG TTGATGGCCT GCTGCATATC
ACTGATATGG CTTGGAAACG TGTTAAACAC CCAAGCGAAA TCGTCAATGT GGGCGACGAA
ATCACTGTTA AAGTGCTGAA GTTCGACCGC GAGCGTACTC GTGTATCTCT GGGCCTGAAA
CAGCTGGGCG AAGATCCATG GGTTGCTATC GCTAAACGTT ACCCAGAAAG CACGCGTCTG
ACTGGCCGCG TGACTAACCT GACTGACTAC GGCTGCTTCG TTGAAATCGA AGAAGGCGTT
GAAGGCCTGG TACACGTTTC CGAAATGGAT TGGACCAACA AAAACATCCA CCCATCCAAA
GTTGTTAACG TTGGTGATGT AGTGGAAGTG ATGGTTCTGG ATATCGACGA AGAACGTCGT
CGTATCTCTC TGGGCCTGAA ACAGTGCAAA TCTAACCCAT GGCAGCTGTT CGCAGAAACC
CACAACAAGG GCGACCGCGT TGAAGGTAAA ATCAAGTCTA TCACTGACTT CGGTATCTTC
ATCGGTCTGG ACGGCGGCAT CGATGGTCTG GTGCACCTGT CCGACATCTC CTGGAACGTG
GCTGGCGAAG AAGCCGTTCG CGAATACAAG AAAGGTGATG AAATCGCCGC TGTTGTTCTG
CAGGTTGACG CAGAGCGCGA GCGTATCTCC CTGGGCGTGA AACAACTGGC TGAAGATCCG
TTCAATAACT ACCTGTCTGT TAACAAGAAA GGTGCTATTG TTACTGGTAA AGTTACAGCA
GTTGACGCCA AAGGTGCTAC AGTTGAATTA GCAGACGGCG TAGAAGGCTA CCTGCGTGCT
TCTGAAGCCT CTCGCGACCG CGTTGAAGAC GCAACACTGG TTCTGAACGT TGGCGACAGC
GTTGAAGCGA AATACACCGG TGTTGATCGT AAAAACCGCG TTGTTAGCCT GTCTGTTCGT
GCGAAAGACG AAGCTGACGA GAAAGATGCA ATTGCAACTG TCAACAACAA GCCTGAAGAA
AGCAATTTCT CCAACGCAAT GGCAGAAGCG TTCAAAGCAG CTAAAGGCGA GTAA
 
Protein sequence
MTESFAQLFE ESLKEIETRP GSIVRGVVVA IDKDVVLVDA GLKSESAIPV EQFKNAQGEL 
EIQVGDEVDV ALDAIEDGFG ETLLSREKAK RHEAWLTLEK AYEEAATVTG IINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTLHLEGK ELEFKVIKLD QKRNNVVVSR RAVIESENSA
ERDQLLENLQ EGMEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
ITVKVLKFDR ERTRVSLGLK QLGEDPWVAI AKRYPESTRL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNVGDVVEV MVLDIDEERR RISLGLKQCK SNPWQLFAET
HNKGDRVEGK IKSITDFGIF IGLDGGIDGL VHLSDISWNV AGEEAVREYK KGDEIAAVVL
QVDAERERIS LGVKQLAEDP FNNYLSVNKK GAIVTGKVTA VDAKGATVEL ADGVEGYLRA
SEASRDRVED ATLVLNVGDS VEAKYTGVDR KNRVVSLSVR AKDEADEKDA IATVNNKPEE
SNFSNAMAEA FKAAKGE