Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1725 |
Symbol | |
ID | 8132667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1991313 |
End bp | 1992617 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644865013 |
Product | permease for cytosine/purines uracil thiamine allantoin |
Protein accession | YP_003017302 |
Protein GI | 253688112 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1457] Purine-cytosine permease and related proteins |
TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCAAG GGAATGCTGT ACCTGGAAAA GAACAACAGG GGCGGCAAAT CTATGATTAC GAATACGAAC CTGTCCCTGC TGAAGCGAGA AAAAGCTGGT ATGTTATTGC TTTAATATGG CTGGCAATGG GGATTGATAT CTCAGGTTTA TTCCTTGGTG CTTTCTTAAG CGGAGGATTG CCTTTCTCCC AAGCTGTTAG CGCCACGCTT ATCGGTTCTG CCTTTTTAGG TGTATTGGCC GCATTATGCG CGAACGTCGG TTATGGCTGT GGGTTATCAA CAACGCTACT AAGTATCTCC GTTTTTGGAC GCTTTGGCGG AAAGCTTATT GGTATTTTCT CTGCTGTATC ATTGGTTGGT TGGTTTGCTT TTCAACTCGA TTTTTTTGGC GTAATGCTGC AAAAAGCACT GTTACATTAT CAAATTGAGC CAAGTCGTTT TCTTATTTTG GTTTTTGGCA TGGCGCTGAT GACCTCTACG GCTATCTGGG GTGTCAGAGC ATTGGGTAAA CTGAGTGTAT TCAGCGTGCC ACTCATGTTG ATATTGATAA TTACAGGCCT GGTTTTAGCG GCGAATAACC ACCCCGAAAT ACCCCTCCCG ATAATTAAAG CACCGATTAG TATGGGAAGC GCTATCTCTT ATGTTGTTTC TATCTGGATA GTCTCTGCCG TGATGTCCCC GGATATAGCT CGCTATGCTA AAACACGTAA AGATGCGTTA CTTGGTGCGG GATTGGGGTT CTTTTTAGGT AATAGCTCAA CAATATTAGT TGCGCTTATT CTGACTCATC TTGTCGGTAC AGAAGATTTA GTTGAGGTGT TTTTCAGTAT TGGTTTGGGG ATGTCTGCAA TTGTGGTGCT TATTTTTGCC CAGTGGACAA CAAATAGTAC CAACCTTGTC TCCGCATCAT TGGGGCTATC CGTTGTTATT CGAGCACTAT CACGGCCGGT ATTGGTTGTG CTAATGGCTA TTGCCGGGTT GCTGTTAGCG TATAACGGTA TGATTAATAA TTTTACCCAA TTCTTGTCGC TGCTCGGTGT CCTGATTTCC CCTATCGCAG GTGTTTATCT CGTCGAATAT TATTTTATTA AGTCCTCACG TTTGCAGAAA AATGTATCAG AGGCTTCATT CTTGAATGTG GCGGCGGCTA TATCTTGGTC ACTTGGTAGT CTTGTGAGCC TGTTAACTTC CCCAGATTTT TTTGATTTAT TTACGATAAG TTCGATCTCT GCTCTGGATG GCGTCATTGT AAGTATGGTG ATTTATATCG GCATGCATAA AATTTTCCCT CAATTGGCGG ATTAA
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Protein sequence | MSQGNAVPGK EQQGRQIYDY EYEPVPAEAR KSWYVIALIW LAMGIDISGL FLGAFLSGGL PFSQAVSATL IGSAFLGVLA ALCANVGYGC GLSTTLLSIS VFGRFGGKLI GIFSAVSLVG WFAFQLDFFG VMLQKALLHY QIEPSRFLIL VFGMALMTST AIWGVRALGK LSVFSVPLML ILIITGLVLA ANNHPEIPLP IIKAPISMGS AISYVVSIWI VSAVMSPDIA RYAKTRKDAL LGAGLGFFLG NSSTILVALI LTHLVGTEDL VEVFFSIGLG MSAIVVLIFA QWTTNSTNLV SASLGLSVVI RALSRPVLVV LMAIAGLLLA YNGMINNFTQ FLSLLGVLIS PIAGVYLVEY YFIKSSRLQK NVSEASFLNV AAAISWSLGS LVSLLTSPDF FDLFTISSIS ALDGVIVSMV IYIGMHKIFP QLAD
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