| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1712 |
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| Symbol | clpA |
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| ID | 8132654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1972171 |
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| End bp | 1974444 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865000 |
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| Product | ATP-dependent Clp protease ATP-binding subunit |
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| Protein accession | YP_003017289 |
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| Protein GI | 253688099 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAATC AAGAACTGGA ACTCAGTCTC AACATGGCTT TCGCCAGAGC GCGTGAGCAC
CGACACGAGT TTATGACCGT GGAGCACCTG CTGTTAGCAC TGCTCAGTAA CCCAGCCGCC
CGTGAAGCAT TGGAAGCCTG TACGGTAGAT TTAGCCGCGC TGCGCCAGGA ACTGGAAGCG
TTCATTGAGC AGACCACACC AACATTACCG CAAAGTGACG ACGAGCGAGA AACTCAGCCT
ACGCTCAGCT TCCAACGCGT ACTCCAACGC GCCGTCTTCC ATGTGCAGTC TTCCGGCCGC
AGCGAAGTGT CCGGTGCTAA CGTTCTGGTC GCAATTTTTA GCGAACAAGA ATCTCAGGCC
GCTTACCTGC TGCGCAAGCA TGACGTCAGC CGTCTGGATG TGGTGAACTT TATTTCTCAC
GGCACACGTA AAGAAGAAAC CGATCAGGCG CCGAACCCTG AAAATCCCGT CAATGAAGAA
CAGGCAGGAG GGGAAGATCG TATGGAAAAC TTCACCACCA ATCTGAATCA ACTGGCTCGC
GTTGGCGGTA TCGATCCGCT CATTGGCCGG GATAAAGAAC TGGAGCGCAC GATTCAGGTC
TTGTGCCGCC GTCGTAAAAA TAACCCGCTG CTGGTCGGCG AATCCGGCGT GGGCAAAACC
GCGATTGCTG AAGGGCTGGC CTGGCGTATT GTGCAGGGTG ATGTACCGGA AGTGATGGCG
GAGTGCACGC TGTACTCGCT GGACATCGGT GCGCTGTTGG CAGGCACCAA ATACCGCGGT
GACTTTGAAA AACGCTTCAA GGCGCTGCTG AAACAGCTCG AACAAGATAA AAACAGTATT
CTGTTCATTG ATGAAATTCA CACGATCATC GGCGCAGGCG CTGCGTCCGG CGGTCAGGTT
GATGCCGCTA ATCTGATTAA ACCGCTGCTT TCCAGCGGCA AGATCCGCGT CATCGGTTCA
ACCACCTATC AGGAGTTCAG CAATATCTTT GAAAAGGATC GGGCGCTGGC GCGTCGTTTC
CAGAAAATCG ATATCACTGA ACCTAGTGTG GAAGAAACCA TACAAATCAT TAATGGTCTG
AAGCCGAAGT ATGAGGCTCA CCATGATGTT CGCTATACGT CGAAAGCGAT TCGTGCGGCG
GTAGAGTTGG CGGTGAAGTA TATCAACGAC CGTCATCTGC CGGATAAGGC GATTGATGTG
ATCGATGAAG CGGGCGCGCG CAGCCGTCTG GTGCCAATCA GCAAACGGAA GAAAACGGTT
AATGTGAGTG ACATCGAATC TGTTGTCGCC CGTATTGCCC GTATTCCAGA AAAAACCGTC
TCCGCCAGCG ATCGCGATGT GCTGAAGAAC CTCAGCGACC GCCTGAAAAT GCTGGTGTTC
GGACAGGATA AAGCTATCGA AGCGCTCTCT GAGTCTATCA AGATGAGCCG AGCAGGGCTG
GGTCAGGAGC GTAAGCCGGT TGGTTCCTTC CTGTTCGCGG GTCCTACCGG TGTCGGTAAG
ACGGAAGTGA CGTTACAACT GGCGAAAGCG CTGGATATTG AACTGCTGCG CTTTGATATG
TCTGAATACA TGGAGCGCCA CACGGTCAGT CGCCTGATTG GTGCGCCTCC GGGCTATGTG
GGCTACGATC AGGGCGGCCT GCTGACGGAT GCCGTGATTA AGCATCCTCA TGCGGTGCTG
CTGCTGGATG AAATTGAGAA AGCGCATCCG GACGTCTTTA ATCTGCTGTT GCAGGTGATG
GATAACGGTA CGCTGACGGA TAACAATGGC CGTAAAGCGG ATTTCCGTAA TGTCATTGTC
GTCATGACCA CCAACGCAGG CGTGCGGGAA ACACAGCGTA AATCCATCGG TATCATCCAT
CAGGACAACA GCAGCGATGC GATGGAAGAG ATCAAGAAGG TGTTTACGCC GGAATTCCGT
AACCGTCTTG ATGGCATTAT CTGGTTCAAC CATCTCTCGA CTGACGTCAT TCAGCAGGTT
GTCGATAAAT TTATCGTAGA ACTTCAGGCG CAACTGGATG CGAAAGGAGT GTCGCTGGAA
GTCAGTGATG AAGCGCGTAA CTGGCTGGCA GAAAAAGGCT ACGACAAAGC GATGGGTGCC
CGACCGATGG CGCGCGTAAT GCAGGAAAGC CTCAAGAAAC CGCTGGCCAA CGAGCTGCTG
TTTGGTTCAC TGGTAGACGG TGGTTCTGTC ACGGTAGAAC TGGATAAAGA GACGCAGCAG
TTGACCTACG GCTTCAAGAG TGCCCAGAAG CGGAAAGCGG AAAGCGTTAA TTAA
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| Protein sequence | MLNQELELSL NMAFARAREH RHEFMTVEHL LLALLSNPAA REALEACTVD LAALRQELEA
FIEQTTPTLP QSDDERETQP TLSFQRVLQR AVFHVQSSGR SEVSGANVLV AIFSEQESQA
AYLLRKHDVS RLDVVNFISH GTRKEETDQA PNPENPVNEE QAGGEDRMEN FTTNLNQLAR
VGGIDPLIGR DKELERTIQV LCRRRKNNPL LVGESGVGKT AIAEGLAWRI VQGDVPEVMA
ECTLYSLDIG ALLAGTKYRG DFEKRFKALL KQLEQDKNSI LFIDEIHTII GAGAASGGQV
DAANLIKPLL SSGKIRVIGS TTYQEFSNIF EKDRALARRF QKIDITEPSV EETIQIINGL
KPKYEAHHDV RYTSKAIRAA VELAVKYIND RHLPDKAIDV IDEAGARSRL VPISKRKKTV
NVSDIESVVA RIARIPEKTV SASDRDVLKN LSDRLKMLVF GQDKAIEALS ESIKMSRAGL
GQERKPVGSF LFAGPTGVGK TEVTLQLAKA LDIELLRFDM SEYMERHTVS RLIGAPPGYV
GYDQGGLLTD AVIKHPHAVL LLDEIEKAHP DVFNLLLQVM DNGTLTDNNG RKADFRNVIV
VMTTNAGVRE TQRKSIGIIH QDNSSDAMEE IKKVFTPEFR NRLDGIIWFN HLSTDVIQQV
VDKFIVELQA QLDAKGVSLE VSDEARNWLA EKGYDKAMGA RPMARVMQES LKKPLANELL
FGSLVDGGSV TVELDKETQQ LTYGFKSAQK RKAESVN
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