Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1663 |
Symbol | |
ID | 8132605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1916874 |
End bp | 1917962 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644864951 |
Product | hypothetical protein |
Protein accession | YP_003017240 |
Protein GI | 253688050 |
COG category | [C] Energy production and conversion |
COG ID | [COG0371] Glycerol dehydrogenase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0224162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACACAA CGACAGTCCG CGTACAGGTT GGTCCCGCCA ACTATTTTTC GTTCTCTGGC GCTATCGATA AGCTGCTGGA GTTTTATCCG TCAGACGTGC TGAAAAACGC GTTGTGGATC TACGGCGAGC GGGCGATTGC GGCGGCGCGA CCGTATTTTC CCGCCGAGTT CGACGCGCCG TCAGCCCGAC GCGTTCAGTT TGGTGCGCAT TGCAGTGAAG GTGAAGTTGC AAAACTAGTG GCACAGGCGG GCGATGACTG TCAGGTTGTC ATTGGCGTCG GCGGTGGAGC GGTGCTGGAT ACCGCGAAGG TCGCCGCGCG TCATATTGGC GTGCCGCTGG TGGCGATTCC AACTATTGCA GCAACCTGTG CGGCCTGGAC GCCGCTGTCC GTCTGGTATA ACGATGCCGG ACAGGCGCTG CGCTTCGAAA TTTTCACTGA CGCTAACCAT CTGGTCTTGG TGGAACCGCG AATTCTGCTG GCGGCACCCG TGGAATACCT ATTGGCTGGC GTCGGCGATA CGTTGGCGAA GTGGTATGAA GCCGTGGTGC TTAGCCCTCA GCCAGAAACG TTACCGCTTT CTGTTCGGCT GGGTTTACAG GCCGCATTGG ATATCCGCAA TGTGTTGCTA CAACAAAGTG CAGCGGCGCT GGAAGCCGTC AAGCGTGGCG AACTGACGCA GGATTTCCTG GATGTGGTGG ATGCGATCAT TGCCGGAGGC GGCATGGTTG GCGGGTTGGG GGAACGTTAC ACCCGTGTGG CGGCAGCGCA TGCGGTTCAT AACGGTTTGA CGGTGTTGCC GCAAACGGAA CGCTTCCTGC ACGGCACTAA AGTCGCTTAT GGCATTCTGG TACAGAGCGC CTTGCTAGGG GATAGTGAAA CGCTGCGCCA ACTGAAAGCG GCGTTTAAGG CGTTTGGTTT ACCAACCTCA CTGGCTGCAC TGGATGTGGA TATTCACGAT CGCGCGGCGC TTCAGGCCGT TATTGCTCGA ACTTTGCAGG CGGGAGAATC CATTCATTAT CTGCCGTTGG CGCTTAATGA AGACGCGTTG ATGGCAGCCT TTACTACTGT TGAATCTACT GAAGAATAA
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Protein sequence | MHTTTVRVQV GPANYFSFSG AIDKLLEFYP SDVLKNALWI YGERAIAAAR PYFPAEFDAP SARRVQFGAH CSEGEVAKLV AQAGDDCQVV IGVGGGAVLD TAKVAARHIG VPLVAIPTIA ATCAAWTPLS VWYNDAGQAL RFEIFTDANH LVLVEPRILL AAPVEYLLAG VGDTLAKWYE AVVLSPQPET LPLSVRLGLQ AALDIRNVLL QQSAAALEAV KRGELTQDFL DVVDAIIAGG GMVGGLGERY TRVAAAHAVH NGLTVLPQTE RFLHGTKVAY GILVQSALLG DSETLRQLKA AFKAFGLPTS LAALDVDIHD RAALQAVIAR TLQAGESIHY LPLALNEDAL MAAFTTVEST EE
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