| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1642 |
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| Symbol | |
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| ID | 8132584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1889976 |
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| End bp | 1891592 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864930 |
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| Product | ABC transporter related |
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| Protein accession | YP_003017219 |
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| Protein GI | 253688029 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGTT CACCTTTATT GCAGATAGAT AATCTCAGCA TTGCCTTCCG CAAAGGCGAT
CAGGAGCAGC GCGTTGTTGA CCAGCTTTCA CTGACGGTGA ATGCTGGCGA GACGCTGGCG
CTGGTCGGTG AATCAGGCTC GGGTAAGAGC GTCACTGCGC TGTCGGTTTT GCGTTTGCTC
CCTTCCCCGC CCGTCATTTA TCCACATGGA GATATCCGCT TCGCAGGACA ATCGCTGCTG
CATGCTGATG AAAAAACACT GCGCCAGATA CGCGGCAATC GGATCGCAAT GATCTTTCAG
GAACCGATGG TGTCGCTTAA TCCTTTGCAA CGCATTGAGA AACAGCTGAT TGAAGTGCTT
TCACTTCACC GGGGCATGCG CACCGAGGCA GCCCGCAGCG AAGTCATCAC CTGTCTGGAT
CGCGTAGGGA TTCGTCAGGC GAAAAGCCGA TTGAATGATT TTCCGCACCA GCTTTCCGGC
GGGGAACGCC AGCGCGTCAT GATTGCAATG GCGCTGCTGA CACAGCCGGA TTTACTGATT
GCCGATGAAC CCACGACGGC GTTGGACGTG ACCGTTCAGG CGCAAATATT GAAATTGCTG
AACGAGCTGA AGCAGGAACT GGGAATGAGT TTACTGTTCA TCACCCACAA CCTGAATATT
GTCCGTCAGT TAGCGGATAA CGTATCGGTC ATGAAAGCCG GTCAGGCCGT GGAGCATAAT
CGCTGTCAGC AACTTTTCAG TGCACCGCAG CACCCCTATA CGCGCCAGCT GCTGGATGCA
GAACCCTCAG GCGAACCGCT TCCGGTGACA GATGACGGTG AACCACTCCT GCGGGTGGAA
AAACTGCACG TTTCGTTTCC CATCAAACGC GGCCTTTTGC GCCGTACCGT TGATGAAAAA
CAGGTAGTGA ACGATATCAA TTTCACCTTG CGGCGCGGCG AAAGTCTCGG TTTGGTAGGA
GAATCCGGCT CAGGCAAAAG TACGACCGGG TTAGCGCTAC TGCGCCTGAT TCAATCACGC
GGTGATATCT GGTTTGACGG TCAGCCCTTA CAGGGGCTCA CCCGTAAGCA AATGCTGCCT
TTCCGCCATC GGATTCAGGT TGTGTTTCAG GATCCGAACT CCGCGCTGAA CCCGCGGCTG
AACGTGGAGC AAATTATTGC TGAGGGGTTG ACCGTCCATC ATAAGTTGAG CAAAGAAGCG
CGCGACCAGC GTGTGGTTGA AGCGATGCAG GAAGTCGGGC TGGATCCTAC GACCCGCTAC
CGCTATCCCT CCGAGTTTTC CGGCGGCCAG CGCCAGCGTA TCGCTATCGC TCGTGCCCTG
ATACTGCAAC CGGAGTTGCT GATCCTTGAT GAACCAACAT CATCGCTGGA CAGAACGGTT
CAGGCACAAA TTCTGGCATT GCTGAAATCA TTGCAGGAAA AGCACAAGAT CGCCTATCTG
TTTATCAGTC ATGATTTGCA GGTTATCCGC TCGCTGTGTC ATCAGGTGAT TGTGTTACGA
CAGGGCGAAG TGGTTGAGCA AGGGGAATGC AAAGCGGTAT TCACGCACCC TGCTGAACAT
TACACGCGGG AATTGCTACA GTTTTCATCT TACTCGACGG AAACACCGTC GGCATAG
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| Protein sequence | MSSSPLLQID NLSIAFRKGD QEQRVVDQLS LTVNAGETLA LVGESGSGKS VTALSVLRLL
PSPPVIYPHG DIRFAGQSLL HADEKTLRQI RGNRIAMIFQ EPMVSLNPLQ RIEKQLIEVL
SLHRGMRTEA ARSEVITCLD RVGIRQAKSR LNDFPHQLSG GERQRVMIAM ALLTQPDLLI
ADEPTTALDV TVQAQILKLL NELKQELGMS LLFITHNLNI VRQLADNVSV MKAGQAVEHN
RCQQLFSAPQ HPYTRQLLDA EPSGEPLPVT DDGEPLLRVE KLHVSFPIKR GLLRRTVDEK
QVVNDINFTL RRGESLGLVG ESGSGKSTTG LALLRLIQSR GDIWFDGQPL QGLTRKQMLP
FRHRIQVVFQ DPNSALNPRL NVEQIIAEGL TVHHKLSKEA RDQRVVEAMQ EVGLDPTTRY
RYPSEFSGGQ RQRIAIARAL ILQPELLILD EPTSSLDRTV QAQILALLKS LQEKHKIAYL
FISHDLQVIR SLCHQVIVLR QGEVVEQGEC KAVFTHPAEH YTRELLQFSS YSTETPSA
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