Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1636 |
Symbol | |
ID | 8132578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1884360 |
End bp | 1884644 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644864924 |
Product | 50S ribosomal protein L25 |
Protein accession | YP_003017213 |
Protein GI | 253688023 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.403182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACTA TCAAAGCAGA AGTACGTAAG GATCAGGGTA AGGGTGCGAG CCGCCGCCTG CGTTCCGCTG GTAAATTCCC AGCCATCGTT TACGGTGGTT CAGAAGCACC AGTATCCATC GAACTGGATC ACGACTCAGT GAAAAACCAA GAAGCGAAAG AAGGCTTCTA CGGTACTGCA CTGATTCTGT CTATCGATGG CAAAGAAGTA CAAGTTAAAG TTCAGGCTGT ACAACGTCAC GTTTACAAGC CAAAACTGAC TCACATCGAC TTCGTACGCG TTTAG
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Protein sequence | MITIKAEVRK DQGKGASRRL RSAGKFPAIV YGGSEAPVSI ELDHDSVKNQ EAKEGFYGTA LILSIDGKEV QVKVQAVQRH VYKPKLTHID FVRV
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