Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1632 |
Symbol | |
ID | 8132574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1879807 |
End bp | 1881555 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644864920 |
Product | sulfatase |
Protein accession | YP_003017209 |
Protein GI | 253688019 |
COG category | [R] General function prediction only |
COG ID | [COG3083] Predicted hydrolase of alkaline phosphatase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.258504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAACCA ACCGTCAGCG CTACCGCGAA AAAGTCTCCC AGATGATCAG TTGGGGACAC TGGTTCGCCT TATTCAACAT TTTGCTCACT TTGGGGCTGG GTAGCCGCTA TCTGTTTGTT GCCGATTGGC CGATCTCCCT GTTCGGTCGA ATTTACGCGC TGGTTAGCTG GCTTGGTCAT TTCAGCTTTA TTGTCTTTGC CGCCTATCTG CTGGTCATCT TCCCGCTCAC GTTTATTGTG ATGTCGCAGC GCCTGCTGCG ATTCCTGTCT GCGGCGCTGG CAACAGCAGG GCTGACGATA CTGTTAGTGG ATGTTGAGGT CTTTACACGT TTTCACCTAC ACCTCAACAG CACCGTTTGG GAACTTGTCG TCAATCCGGG ACAGGGGGAG ATTGCCCGCG ACTGGCAGTG GATGTTTATC GGCATTCCAT TGATTTTCAT GGTGGAAATG CTGTTCGGCA CGTGGTGCTG GCAAAAATTA CGCAGTCTAA ACCGCCGCCA CTTTGGCAAA CCGCTGGCGG GCGTTTTCAT CTCGGCGTTC TTTGCATCGC ACCTGATGTA CATCTGGGCC GATGCAAATT TCTATCGCCC GATTACGATG CAACGCGCCA ACCTGCCGCT GTCTTATCCG ATGACGGCTC GCCGTTTTCT GGAAAAACAT GGCCTGCTGG ATGCACAGGA ATATCAGCGC CGGCTAACGC AGCAGGGTAA CCCTGAAGCC ATAACAGTGG AGTATCCGCT CAATAACATC ACCTTCCGCG ATAACGGTAG CGGCTACAAC CTGCTGATGG TGATGATCGA CGATACGCAA CCTGATGCCA TACAAAACCG CATGCCGAAC CTGTCGCGCT TCGCCGCAGA AAACGTGCGC TTCAGCGATC ATTACGATTC GGGTTCGCAG CCAGACGCGG CCTTGTTTAA CCTGTTCTAC GGCCTCTCGA CGACCTATAT GGATGGCGTC CTGAGCGCGC GTAAACCTTC AGCGTTAATC ACCGCATTGA GCCAGCAAGG CTATCAGTTC GGGCTCTTTT CGGCGAACGG CTTCAACAGC CCGCTTTATC GTCAGGCGCT GCTTTCTGAT TTCTCCTTGC CTGCGCCGCA GCAGCAAAGC GGCGATGTCA TCATCACGCA ATGGCAGGAG TGGCTCAACC GCGATAGTAA CCCTGCCCCT TGGTTCTCTT ACATTGAACT AAACAGCGCA CCGAAAAATG CGTCTGGTAA AGATGCAGAG CCAAACAGCC GAATGAACAT TCAGGACGTT GACCGCCAAA TTGGCCAAAT CATTCGTACC TTGCAGGAAA AAAACATTCT GGATAACACG GTCATCATCG TGACAACCGC CCAAAACCAG AATGCCAATA CCAGTAACGC GGCACGTTTT GCCCGTACCC AGTGGCAAAC GCCGCTCATT GTTCACTGGC CGAATACCCC TGCGCAGACT ATTACGAAAA TGACGGACAA CAAAGACGTC ATGACCACGC TGATGCAACG CCTGCTCCAT GTTAAAAACA GCACGGATGA TTATTCACAG GGTGAAGACT TATTCTCTGC CCAACGGCGC TACCCGTGGT TGATTAACGG TAACGGCGGC ACACTGCTAA TCACAACGCA GGATCAGCTC ATCGTACTGG AAAGTAACGG CAACTACCGC GCTTACGACA CGCAGGGAAA TCGGCTGAAT GATGAAAAAC CACAGCTTGC TCTGCTCTTA CAGGTACTAA CGAACGAAAG ACGCTTTATT GCCAACTAA
|
Protein sequence | MVTNRQRYRE KVSQMISWGH WFALFNILLT LGLGSRYLFV ADWPISLFGR IYALVSWLGH FSFIVFAAYL LVIFPLTFIV MSQRLLRFLS AALATAGLTI LLVDVEVFTR FHLHLNSTVW ELVVNPGQGE IARDWQWMFI GIPLIFMVEM LFGTWCWQKL RSLNRRHFGK PLAGVFISAF FASHLMYIWA DANFYRPITM QRANLPLSYP MTARRFLEKH GLLDAQEYQR RLTQQGNPEA ITVEYPLNNI TFRDNGSGYN LLMVMIDDTQ PDAIQNRMPN LSRFAAENVR FSDHYDSGSQ PDAALFNLFY GLSTTYMDGV LSARKPSALI TALSQQGYQF GLFSANGFNS PLYRQALLSD FSLPAPQQQS GDVIITQWQE WLNRDSNPAP WFSYIELNSA PKNASGKDAE PNSRMNIQDV DRQIGQIIRT LQEKNILDNT VIIVTTAQNQ NANTSNAARF ARTQWQTPLI VHWPNTPAQT ITKMTDNKDV MTTLMQRLLH VKNSTDDYSQ GEDLFSAQRR YPWLINGNGG TLLITTQDQL IVLESNGNYR AYDTQGNRLN DEKPQLALLL QVLTNERRFI AN
|
| |