Gene PC1_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1617 
Symbol 
ID8132558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1868121 
End bp1868777 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content47% 
IMG OID644864904 
Producthypothetical protein 
Protein accessionYP_003017194 
Protein GI253688004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.296873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAT TAAAGTTAGC CGCTTTATTA CCTGGGTTTT TAGCACTCAA TAACTCTGTC 
TGGGCCAGTG ATGCAGCGAT GAATATTGAA GAGTTTGGCA CCTCTCCGTT AAATGATCAC 
GATCTTGTGC TTGCACCACT CAATACCGAA GTGCCTTTTT ATATTGCAGG TCACCGAAGC 
CACAGCTCTC ATCGTAGCCA CAGTTCTCAC AGCTCTCACC GTTCTTCATC AGGTGGTGGA 
TATTACGGCG GTAGCGCTAC ACCATACTAC CCCCGCAGCA GTGATTCATC TTCCGGGAGT 
AGTAACTCAG GCGTGACGTC ATCACCGTCT TCGCCAGCGG CATCTTCACC TTCGACGAGA 
GCACTACGTT CAGATAGTGG GAACTCTGTA AGCTCTTCGA GATCGGGAAC GAGCCAAAAT 
ACCAATTCCT CCATGAATGG TGTCTCTTCC GATCAGGAAA AGAGACGCAG GCTTATCATG 
CGTGTGCAAT TTGCCTTGTT TGATAAAGGC TATTATGAGG GCATCATTGA TGGCGTCATG 
GGACCAGGAA CCCGATCTGC TATAAGAACA TATCGGATTA ATAAAGGTCT TCCTTTACCA 
GCGACTGAAA CGTTAGATAC CCAGTTACTG AATTCATTGA ATGTGCTTGC ACGGTAA
 
Protein sequence
MKRLKLAALL PGFLALNNSV WASDAAMNIE EFGTSPLNDH DLVLAPLNTE VPFYIAGHRS 
HSSHRSHSSH SSHRSSSGGG YYGGSATPYY PRSSDSSSGS SNSGVTSSPS SPAASSPSTR 
ALRSDSGNSV SSSRSGTSQN TNSSMNGVSS DQEKRRRLIM RVQFALFDKG YYEGIIDGVM 
GPGTRSAIRT YRINKGLPLP ATETLDTQLL NSLNVLAR