| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1547 |
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| Symbol | |
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| ID | 8132488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1802472 |
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| End bp | 1804778 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864836 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003017126 |
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| Protein GI | 253687936 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGGC TTACTTCACT GACTATAGCA ATTGGACTTG CTTGTAATCC GGCGTTTGCG
CAGGAGTTGA CGTCTGCGCC GGCATCAATA TCGCCTTCAC ATCAGCAACG TGATGCGTTT
GTCACGGATC TGCTGAAAAA AATGACGCTG GAAGAGAAGA TCGGCCAGCT CCGATTGATC
AGCGTTGGGA CGGATAACCC CAAAGAAGCC ATTCGGGAAA TGATCAGAAA TGGTCAGGTT
GGCGCGATTT TTAATACGGT AACCCGCCCG GACATTCGTG CGATGCAGGA TCAGGTCATG
CAACTCAGCC GCCTGAAGAT TCCGCTGTTT TTTGCCTACG ACGTGGTGCA CGGCCAGCGC
ACCATTTTCC CTATCGCATT GGGACTGGCT TCCAGCTGGG ACATGGCCGC GATTGAGAAA
AGTGCGCGCG TGGCGGCTTA TGAAGCGACG GAAGACGGCC TGAACATGAC CTGGGCGCCG
ATGGTGGATA TCACCCGCGA TCCGCGCTGG GGCCGCGTGT CGGAAGGTTT CGGTGAAGAC
ACCTGGCTGA CCAGCAAAAT TGCTGGTGTG GTTGTGAAAG CCTTTCAGGG CGATGACGTA
ACGGGTCGCC ATTCGCTGAT GACCAGCGTA AAACACTATG CGCTTTACGG CGCGGTGGAA
GGTGGGCGCG ACTATAACAC CGTGGACATG AGCCTTCAGC GCATGTTCCA GGACTATATG
CCGCCTTATA AAGCGGCGAT TGACGCGGGC AGCAGCGGCG TGATGGTCGC GCTGAATTCA
ATCAACGGTA CGCCAGCTAC CTCAAACAGC TGGCTGCTGA AAGATGTTCT GCGCGATCAG
TGGAATTTCA AAGGCATCAC CATTACCGAT CACGGTGCGA TTAAAGAGCT GATTAAGCAC
GGCGTGGCCA GCGATCCGCG TGATGCATCG CGTCTGGCGG TGAAATCCGG TATCGGTATG
AGCATGAGCG ACGAGTATTT CGTCCGGTAT CTGCCCGAAC TGGTGAAAAG CGGGGCAGTG
AGCATGCAGG AGATCGATGA TGCCTGCCGT CAGGTGTTGA ACGTAAAATA TGATATGGGG
CTGTTTGAAG ATCCGTACCG CCATCTGGGG CCGGTAGGTT CTGATCCTGT GGATACCAAT
GCGGAAAGCC GCTTGCACCG TCTGGACGCG CGTGATGTAG CGCGTAAAAG TCTGGTGCTG
TTGAAAAACC GTCTGCAAAC GCTGCCGTTG AAAAAAGAAG GCACGATTGC TGTTGTCGGG
CCATTGGCTG ACAGCCAGCG CGATACGATG GGAAGCTGGT CTGCTGCGGG CGTAACGAAA
CAGACGATCA CCGTTTATCA GGGGCTGAAG AATGCCGTCG GCGATAAAGC CACCATCCTC
TATGCCAAAG GTGCCAACGT CAGTAATCAC AAAGGTATCA TCGACTTCCT GAATCAGTAT
GAAGATGCCG TGCAGGTAGA TAAACGTCCG CCGCAGGTGA TGATCGATGA AGCCGTTGAG
GCAGCGAAGA AAGCGGATGT GGTGGTTGCT GTCGTCGGCG AAGCTGCCGG AATGGCGCAT
GAAGCATCCA GCCGCTCGAA CATTGACCTG CCGCAAGGCC AGCGTGACCT GATCGCGGCG
CTGAAAGCGA CGGGTAAACC GCTGGTTCTG GTGCTGATGA ATGGCCGCCC TCTGGCGCTG
GTGCGTGAAG ATCAGCAGGC CGATGCGTTA CTGGAAACCT GGTTCAGCGG CACCGAAGGC
GGTAATGCGA TCGCCGATGT GCTGTTTGGT GACTATAACC CGTCCGGCAA GCTGCCAATG
TCCTTCCCGC GTTCCGTCGG TCAGATCCCG ATTTATTACA ATCACCTGCC GTCAGGTCGT
CCTTACACGC CGGAAAACCC AGGCAAATAT ACGTCTCACT ACTATGACGA AGCCAATGGG
CCGCTCTATC CGTTCGGTTA CGGCCTGAGC TATACCACGT TCAGCGTGTC AGACGTACGT
TTGTCCAGCC AGACGATGAA GCGTAACGGG ACGATCAACG CCAGCGTGAC GGTGAAAAAC
ACCGGTAGCC GCGCGGGGGA AACGGTCGTG CAACTGTACG TGCACGATGT GGTGGCTTCC
ATCAGCCGTC CGGTGAAAGA GCTACGCGGT TTTGAGAAAG TGATGCTACA GCCGGGAGAA
TCTCGCACGG TCACGTTCAC GCTCGATCAG GAAGCACTGA AGTTCTACAA TGCTCGTATG
CAGCAGGTGG TAGAGCCCGG TAAATTCGAC GTGATGATCG GTCTGGATTC ACAGCGAGTG
AAGAGCGATA GCTTCACCTT GCTATAA
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| Protein sequence | MKWLTSLTIA IGLACNPAFA QELTSAPASI SPSHQQRDAF VTDLLKKMTL EEKIGQLRLI
SVGTDNPKEA IREMIRNGQV GAIFNTVTRP DIRAMQDQVM QLSRLKIPLF FAYDVVHGQR
TIFPIALGLA SSWDMAAIEK SARVAAYEAT EDGLNMTWAP MVDITRDPRW GRVSEGFGED
TWLTSKIAGV VVKAFQGDDV TGRHSLMTSV KHYALYGAVE GGRDYNTVDM SLQRMFQDYM
PPYKAAIDAG SSGVMVALNS INGTPATSNS WLLKDVLRDQ WNFKGITITD HGAIKELIKH
GVASDPRDAS RLAVKSGIGM SMSDEYFVRY LPELVKSGAV SMQEIDDACR QVLNVKYDMG
LFEDPYRHLG PVGSDPVDTN AESRLHRLDA RDVARKSLVL LKNRLQTLPL KKEGTIAVVG
PLADSQRDTM GSWSAAGVTK QTITVYQGLK NAVGDKATIL YAKGANVSNH KGIIDFLNQY
EDAVQVDKRP PQVMIDEAVE AAKKADVVVA VVGEAAGMAH EASSRSNIDL PQGQRDLIAA
LKATGKPLVL VLMNGRPLAL VREDQQADAL LETWFSGTEG GNAIADVLFG DYNPSGKLPM
SFPRSVGQIP IYYNHLPSGR PYTPENPGKY TSHYYDEANG PLYPFGYGLS YTTFSVSDVR
LSSQTMKRNG TINASVTVKN TGSRAGETVV QLYVHDVVAS ISRPVKELRG FEKVMLQPGE
SRTVTFTLDQ EALKFYNARM QQVVEPGKFD VMIGLDSQRV KSDSFTLL
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