| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1531 |
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| Symbol | |
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| ID | 8132472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1785345 |
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| End bp | 1786940 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864820 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003017110 |
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| Protein GI | 253687920 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CAGGAATACG ATTCACATTG GCTGCGTTGA CGCTGGCGGT CGCCTCGGCG
GCGTCGGCGA ATACTCTGGT ATATTGCTCA GAAGGATCGC CGGAAAACTT TAACCCACAG
CTTTACACGT CTGGCACCAG CGTGGATGCC AGCGCGGTGC CGATTTATAA CCGTCTGGTG
GATTTCAAAG TTGGCACCAC GGAGCTGATA CCGAGTCTGG CAGAGCGCTG GGATATCAGC
GCCGATGGGC GCGTGTATAC CTTCCATTTG CGCAAAGGCG TTAAATTCCA GAGCAACAAA
TATTTTAAAC CCTCGCGTGA TTTTACCGCT GACGATGTTA TTTTCTCCTT CATGCGGCAA
AAAGATCCGC AGCACCCTTA TCACAACGTC TCGAAAGGCA CTTATGCCAA TTTTGAAAGT
TTATCCTTTG GCTCGCTGAT TCAGAACATC GAGAAGGTGG ATGACCATAC GGTGCGCTTT
ACGCTCTCCC ATGCGGAAGC CCCGTTTCTG GCTGATTTAG CCTGGTACTT TGCTTCCATT
CTCTCTGCGG AATATGCCGA TGCGATGCTA AAAGCTGGCA CGCCGGAACG CGTGGACATG
GACCCGATTG GCACTGGACC TTTCGAGTTA GCGCAGTATC AGAAAGATTC CCGTATCCTC
TTTAAGGCAT TTCCTGCCTA TTGGGAAGGC AAGGCCAAGC TGGATCGGTT GATTTTCACT
ATTACGCCGG ATGCCTCCGT GCGGTACGCC AAGCTGGAGA AGAATGAGTG TCAGGTGATG
CCGTTCCCTA ATCCTGCCGA TCTACCGCGC ATGAAAGAGA ACAAAGATAT CGTGCTGATG
CAGAAAGCGG GATTGAATAC CGGCTTCCTG TCGTTCAATA CCCAAAAAGC GCCGACGGAT
AATGTGAAAG TGCGGCAGGC GTTAACGATG GCGATTAATA AGCCCGCGAT TATCGACGCC
GTTTTTCAGG GAACCGGAAC GGCGGCGAAA AATCTGCTGC CGCCGGGTGT CTGGAGTGCT
GACAGCGACC TGAAAGATTA TGACTACGAT CCTGAGAAGG CTAAGGCGTT GCTGAAAGAA
GCGGGCTTGG CTGAGGGAAC CACGATCGAA CTGTGGGCGA TGCCGGTGCA ACGTCCGTAT
AACCCTAATG CCCGCCGGAT GTCGGAGATG ATTCAGGCCG ACTGGGCGAA AGTCGGCGTG
CAGGCCAAAA TTGTCACCTT CGAGTGGGGG GAATACCTAA AGCGGGTGAA AAGCGGTGAG
CATCAGGCGG CGTTGATGGG TTGGACAACG GCGACGGGCG ATCCTGATAA CTTCTTCGGA
CCGCTTTTTA CCTGCACGGC GGCCAACGGT GGTTCCAATT CGGCAAAATG GTGCTATCCG
CCGTTTGATA AAATCATCAC CGAAGCGCGC GCTTCACAGG ATCATGAACA GCGAATAGCG
TTATACAAGC AGGCACAGCA GATGATGCAC GATCAGGCAC CCGCCGTCAT GATTGCGCAT
TCCACTCTCT CTATTCCGGT ACGCAAGGAA GTGATCGGTT ATGAAGTTGA CCCGTTTGAT
AAGCATATTT TTTATCAGGT CGATGTGAAG AAGTAA
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| Protein sequence | MKKAGIRFTL AALTLAVASA ASANTLVYCS EGSPENFNPQ LYTSGTSVDA SAVPIYNRLV
DFKVGTTELI PSLAERWDIS ADGRVYTFHL RKGVKFQSNK YFKPSRDFTA DDVIFSFMRQ
KDPQHPYHNV SKGTYANFES LSFGSLIQNI EKVDDHTVRF TLSHAEAPFL ADLAWYFASI
LSAEYADAML KAGTPERVDM DPIGTGPFEL AQYQKDSRIL FKAFPAYWEG KAKLDRLIFT
ITPDASVRYA KLEKNECQVM PFPNPADLPR MKENKDIVLM QKAGLNTGFL SFNTQKAPTD
NVKVRQALTM AINKPAIIDA VFQGTGTAAK NLLPPGVWSA DSDLKDYDYD PEKAKALLKE
AGLAEGTTIE LWAMPVQRPY NPNARRMSEM IQADWAKVGV QAKIVTFEWG EYLKRVKSGE
HQAALMGWTT ATGDPDNFFG PLFTCTAANG GSNSAKWCYP PFDKIITEAR ASQDHEQRIA
LYKQAQQMMH DQAPAVMIAH STLSIPVRKE VIGYEVDPFD KHIFYQVDVK K
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