| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1520 |
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| Symbol | |
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| ID | 8132461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1771366 |
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| End bp | 1773108 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864809 |
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| Product | ABC transporter related |
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| Protein accession | YP_003017099 |
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| Protein GI | 253687909 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.226797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAATT CTCCCGTGCA AATCGCGTTG GACGGGCTGG AAAAACGCTT TGCCGGACAG
GAAAAACCCG CGCTCGCCAG CCTCACTGCC GAGATACGCA GCGGCGCCGT GACCGGGCTG
GTTGGCCCAG ACGGTGCGGG TAAAACCACC TTGCTGCGCA TGCTGGCGGG ACTATTAACA
CCCAGCCACG GTACGCTGCG CGTGGCAAAT CTGGATCCCA TCAAAGAAGA TCGCCAGCTC
CATGCCATTT TGGGCTACAT GCCACAAAAG TTCGGCCTGT ATGAAGATCT GACGGTAATG
GAAAACCTGA CGCTGTATGC CGATCTGCGC GGTATTACTG GCGAGGTACG CAAAGACACC
TTCGATCGCC TGCTGTCATT TACCGACCTG ACCCGTTTTA CCGACAGACT GGCAGGCAAA
CTCTCCGGCG GCATGAAACA GAAACTGGGG CTGGCCTGTA CGCTGCTCGG GCAGCCTAAA
GTACTGCTGC TGGATGAACC GGGCGTCGGC GTCGACCCCA TTTCTCGCCG TGAACTGTGG
CACATGGTGC ACGAACTGGC TGACGACGGC ATGTTGATTC TATGGAGCAC GTCGTATCTC
GATGAGGCAG AGCAGTGTCG GGATGTGCTG CTACTGAACG AAGGCGAACT GCTGTATCGC
GGCGCGCCGC GCGATCTGAC CGCCCGCATG GCGGGACGCT GCATTCTAAT TGATACTGGC
GATCGTCGAC ATCGGGATGT GTTGCAGGAA GCGCTGCGTT TGCCGCAGGT CAGCGATGGC
GTGATTCAGG GACAATACGT CAGGCTGATA CTCAAACACG ATGCGGATCG GGCATCGCTG
CTCTCTGCCC TGCATCTGGA AGCGGGTTGT CTGCACGACA CCGATCCGCG CTTTGAGGAT
GCCTTTATCG ATCTGCTGGG TGGCGGCCCA GCCAGCGAAT CATCATTGGC GAGCATCATG
CCGCAGATTG ATGTCAGCGG CGGCGAAACG GTCATTGAAG CTCAGGCACT GACGAAAAAA
TTTAGTGATT TCGCCGCAAC CGATCACGTC AGTTTTCAGG TAAAGCGGGG AGAAATTTTC
GGCCTGCTCG GCCCGAACGG AGCAGGTAAA TCAACCACTT TCAAGATGAT GTGCGGCCTG
CTGGTGCCGA CTGACGGCAA AGCGCTGGTG CTCGATATGG ATCTGAAAAC CAGTTCCGGC
AAAGCCCGTC AGCATTTGGG GTACATGGCG CAAAAATTCT CGCTCTACGG TAACCTGACC
GTCGAACAAA ACCTGCGCTT TTTCTCCGGC GTTTATGGGC TAAAAGGCAA GGTGCAGCGC
GATAAAATGG CCGGTATGAG CGATACCTTC AACTTTCAGC CGATTTATCG CCAAACGCCG
GACGCTCTGC CGCTGGGCTT TAAGCAGCGG CTGGCGCTGG CCTGTGCGCT GATGCATGAA
CCCGATATTC TTTTCCTCGA CGAACCGACC TCCGGCGTCG ATCCGCTGAC CCGACGTGAA
TTCTGGATAC ATATCAACGG TATGGTTAAC CGCGGCGTCA CAGTGATGGT CACCACACAC
TTTATGGACG AAGCGGAATA TTGCGACCGC ATCGGACTGG TGTATCGCGG TAAGCTGATC
GCCAGCGGCA CACCGGACGA ACTGAAACAG CAGGCAGCCA GCGCAGAGAC GCCATCACCA
ACGATGGAAG AAGCGTTTAT CGCGCTGATT CAGGCATACG ATGGGGAGGC GGAACATGGT
TGA
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| Protein sequence | MTNSPVQIAL DGLEKRFAGQ EKPALASLTA EIRSGAVTGL VGPDGAGKTT LLRMLAGLLT
PSHGTLRVAN LDPIKEDRQL HAILGYMPQK FGLYEDLTVM ENLTLYADLR GITGEVRKDT
FDRLLSFTDL TRFTDRLAGK LSGGMKQKLG LACTLLGQPK VLLLDEPGVG VDPISRRELW
HMVHELADDG MLILWSTSYL DEAEQCRDVL LLNEGELLYR GAPRDLTARM AGRCILIDTG
DRRHRDVLQE ALRLPQVSDG VIQGQYVRLI LKHDADRASL LSALHLEAGC LHDTDPRFED
AFIDLLGGGP ASESSLASIM PQIDVSGGET VIEAQALTKK FSDFAATDHV SFQVKRGEIF
GLLGPNGAGK STTFKMMCGL LVPTDGKALV LDMDLKTSSG KARQHLGYMA QKFSLYGNLT
VEQNLRFFSG VYGLKGKVQR DKMAGMSDTF NFQPIYRQTP DALPLGFKQR LALACALMHE
PDILFLDEPT SGVDPLTRRE FWIHINGMVN RGVTVMVTTH FMDEAEYCDR IGLVYRGKLI
ASGTPDELKQ QAASAETPSP TMEEAFIALI QAYDGEAEHG
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