Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1479 |
Symbol | |
ID | 8132419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1726588 |
End bp | 1727385 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644864768 |
Product | hypothetical protein |
Protein accession | YP_003017059 |
Protein GI | 253687869 |
COG category | [S] Function unknown |
COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAT GGCCGTGGAA AAACTCTCAA CCTCAGGTGC AGACGCTTGA ACACTGGCAA GCTGCGATTT CCATCCCGCT TCTCGCCCCC TTAAGCGATG AAGAACGCCA GAAACTGGTC ACCCTTGCCG ATCAGTTTCT GAAGCAAAAG CGCCTGATTC CGTTGCAGGA ACTGGTGTTA ACGGAAATCA TGCAGCAGCG CATCGCCCTG TTGTTTTCCC TGCCGGTGCT GTCGCTGGGA ATAGATGCGC TGGATGGCTT CCACGAAGTT TTGGTTTACC CCGGCCCGTT TATTGTCGAG GAAGAGTGGC AAGACGACAT CGGGCTCGTG CATACGGGGA AAATGGTACA GTCCGGGCAA AGCTGGGATC AGGGGCCGAT TGTCCTCAAC TGGCAGGAAG TACAGGACTC CTTCGATCTC TCCGGTTTCA ACCTCATCAT TCATGAAGTC GCGCACAAGC TGGATATTCG CAGCAGCGGC GAAGCAACGG GGGTTCCCTT GATTCCCCTG CGCGATATTG CTGTCTGGGA ACAGCATCTG CACGGTGCGA TGGATGCTTT GCAGGAAGAG ATCGATCTGG TTGGCGAAGA GGCCGCCAGC ATGGATCCCT ACGCCGTCCA CGATCCGGCA GAGTGCTTTG CGGTATTGTC AGAATACTTT TTCAGCGCGC CCGAACTGCT CGACGAGCGT TTCCCCGACC TGTACCGCTG CTTCCAAAAA TTCTATCGAC AAGATCCACT CGCTCGCCTG AAAAGCTGGC AAAGCAGCGT CAACTACCGT GCCCCATCCA TTTACTAA
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Protein sequence | MIKWPWKNSQ PQVQTLEHWQ AAISIPLLAP LSDEERQKLV TLADQFLKQK RLIPLQELVL TEIMQQRIAL LFSLPVLSLG IDALDGFHEV LVYPGPFIVE EEWQDDIGLV HTGKMVQSGQ SWDQGPIVLN WQEVQDSFDL SGFNLIIHEV AHKLDIRSSG EATGVPLIPL RDIAVWEQHL HGAMDALQEE IDLVGEEAAS MDPYAVHDPA ECFAVLSEYF FSAPELLDER FPDLYRCFQK FYRQDPLARL KSWQSSVNYR APSIY
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