Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1457 |
Symbol | |
ID | 8132396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1707201 |
End bp | 1707503 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644864747 |
Product | putative transcriptional regulator, XRE family |
Protein accession | YP_003017039 |
Protein GI | 253687849 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0521049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCAGAA CGCTGGAACA GCTTCTTGCG GATGAAAAAC CAGAGGTCGT CATTGATGCT CACGCTCTTG CGGCAGATAT GTTGCTCAAT ATTCACCTCG CTGAACTGCG TGAGAGGGTG CAAAAAACGC AAGTAGACAT GGCGCAGACG CTTGGATTAA AACAGCCGAC CGTGGCGGTA ATGGAGAAAC CCGGTCGCGA TCTGAAACTT TCCACACTCA AACGCTATGT TGAGGCGACC GGCAGTAAGC TGCATCTTGA TGTTGAGCTG CCGGACGGCT CTCATTACGT GTTCACGCTG TAG
|
Protein sequence | MGRTLEQLLA DEKPEVVIDA HALAADMLLN IHLAELRERV QKTQVDMAQT LGLKQPTVAV MEKPGRDLKL STLKRYVEAT GSKLHLDVEL PDGSHYVFTL
|
| |