| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1413 |
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| Symbol | |
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| ID | 8132352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1653388 |
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| End bp | 1653897 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864703 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003016995 |
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| Protein GI | 253687805 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.70955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGAGT CTGAACTCAG AATGCTGTTC AACCACTATG CAGAGCGGTT AGAACGCTAT
CTCAATCATA AACTGCGCGA CCCTCAGGCA GCAGCAGATC TGGTGCAAGA GAGTTTTTTA
CGGTTAGCGC AACGGCTGGA ACAGCAGAAT GATGTAGACG ACAAGAAGGC ATATCTCTAT
AAGACAGCAA ATAATTTGCT GCTTGACCAT GTTCGCCACC AGCAGCGCTG GCAGATGGCG
ACGTCCGTTG ACGATACGGA GGCGACGCTG GAATACCTGC CGGATGCCGC GCCTCAGCTC
GATCAAACGG CCATCGCCCA ACAGGAGCTG GAACGTCTGG CAAATGTGCT GTCGACGCTA
CCTGAACGCA CGCAGTTGAT ATTTCATCTG CACCGGTTTG AACACATGAC GCAGGCGCAA
ATTGCTCAGC AGTTGGAGAT TTCCCTCAGC ACCGTTGAGA AACATCTTGC CATGACGTTG
CACGCGATGA TGACGATCCG CACCTCGTGA
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| Protein sequence | MSESELRMLF NHYAERLERY LNHKLRDPQA AADLVQESFL RLAQRLEQQN DVDDKKAYLY
KTANNLLLDH VRHQQRWQMA TSVDDTEATL EYLPDAAPQL DQTAIAQQEL ERLANVLSTL
PERTQLIFHL HRFEHMTQAQ IAQQLEISLS TVEKHLAMTL HAMMTIRTS
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