Gene PC1_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1392 
Symbol 
ID8132331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1626687 
End bp1627658 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content58% 
IMG OID644864682 
Producthypothetical protein 
Protein accessionYP_003016974 
Protein GI253687784 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATGG GTGTTTTATT TGCGCTGGCC GCTGGCCTCA TGTGGGGGCT GATTTTCGTT 
GGGCCATTGA TCGTACCGGA CTATTCTGCT GCCTTGCAGT CCACCGGACG CTATCTGGCC 
TTTGGACTGA TTGCCTTACC GCTGGCGTGG CTCGATCGTC GTCGTCTGCG TCAGTTAACC 
CGTCGCGACT GGCTGGAAGC CACGAAACTC ACGGTTATCG GTAATCTGCT GTACTACTTC 
CTGCTCGCCA GCGCCATCCA GCGTACTGGC GCGCCGATCT CGACGATGAT TATCGGCACC 
CTTCCCGTGG TGATTTCCGT TACCGCCAAT GTGTTGTACA GCAAGCACGA TGGCCGCGTG 
GCCTGGCGTC GGCTGCTGCC TTCGCTGCTG CTGATTGCGG CCGGTCTGGT CTGCGTCAAC 
ATTGCGGAAC TGAAAGGAAC GACCGTTGAA TTCGATTTAT GGCGCTATGC CAGCGGCATT 
GCGATGGCAT TTTGCGCGGT CATTTGCTGG ACCTGGTATC CGCTGCGTAA CGCCCGCTGG 
CTCCGCGACC ACAAAGACAA TACGCCGACC ACCTGGGCTA CAGCGCAAGG GCTGGTCACG 
CTACCGCTGG CACTGCTGGG CTATCTGCTG GTATGCGGCC ATCTGGCGCT AACGGACAGT 
ACCTTTACGC AGCCGTTCGG CCCGCGACCT GAAGTTTTTA TTCCGCTGAT GATTGCGATT 
GGGCTGTTTT GCTCATGGAT CGGTACGCTG TGCTGGAATG AAGCCAGCCA GCGCCTGCCG 
ACGGTGCTGG TAGGGCCATT GATTGTGTTT GAAACGCTGG CGGGGCTGGC CTACGCCTTC 
ATCATCCGGC AATCCTGGCC ACCGCTGCTG ACGCTTTGCG GCATCAGCTG TCTGATTGTC 
GGTGTGATCT ACGCCATGCG GGTGAAACCG GAACCTGTGG TGGTAGCCGT GCCGGTTTCA 
CGGACAGAGT AA
 
Protein sequence
MLMGVLFALA AGLMWGLIFV GPLIVPDYSA ALQSTGRYLA FGLIALPLAW LDRRRLRQLT 
RRDWLEATKL TVIGNLLYYF LLASAIQRTG APISTMIIGT LPVVISVTAN VLYSKHDGRV 
AWRRLLPSLL LIAAGLVCVN IAELKGTTVE FDLWRYASGI AMAFCAVICW TWYPLRNARW 
LRDHKDNTPT TWATAQGLVT LPLALLGYLL VCGHLALTDS TFTQPFGPRP EVFIPLMIAI 
GLFCSWIGTL CWNEASQRLP TVLVGPLIVF ETLAGLAYAF IIRQSWPPLL TLCGISCLIV 
GVIYAMRVKP EPVVVAVPVS RTE