| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1390 |
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| Symbol | |
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| ID | 8132329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1625451 |
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| End bp | 1626167 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864680 |
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| Product | ABC transporter related |
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| Protein accession | YP_003016972 |
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| Protein GI | 253687782 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGTAG AGGTGAATGT GCAGGAAAAG GCACAGGCAG CGGAGGCGGT GATTGAAACT
CGCCAGCTCT ATAAACGCTT TGGTCAGGTT ACCGCGCTGG AGAACATCAA TATCCGCATC
GCGCGTGGCG AATTTGTCGC CATCATGGGC GCGTCTGGCT CGGGTAAAAC CACGCTGATG
AATATTCTCA CCTGTCTGGA TACGGTGAGC GAAGGACAGG TATTGCTGGA TGGTGTCGAC
GCGGCTGCGC TGGACGAGGA AGGACGGCGT CAGTTTCGTG CTGATAAGAT TGGGTTGGTC
TTTCAGCAGT TCCACCTGAT TCCGTTTTTG ACCGCGCTGG AGAACGTAAT GCTGGCGCAG
CATTACCACA GCGTGGTCGA TGAAGCGGCG GCGCAGCGCG TGCTGGATCA GGTTGGTTTG
GCGCATCGCG TGAATCACTT ACCGAGCCAG CTTTCCGGTG GTGAGCAGCA GCGTGTGTGT
ATCGCCCGTG CGTTGGTGAA CGAGCCTCCT GTGATTTTCG CTGATGAACC AACGGGAAAT
CTGGACGAAG AGAACGAACA ACGCGTGCTG GATCTGCTGA AAGATCTGCA CCGGCAGGGA
CGTACCATTG TCATGGTGAC ACACAATCCT GAGCTGGGGC GGTTTGCTGA CCGCATTATC
CGTCTGCAAC ACGGTAAGTA TTTTGGTGAA GAGGTCAATC ATCATGAAAT GGCGTAA
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| Protein sequence | MSVEVNVQEK AQAAEAVIET RQLYKRFGQV TALENINIRI ARGEFVAIMG ASGSGKTTLM
NILTCLDTVS EGQVLLDGVD AAALDEEGRR QFRADKIGLV FQQFHLIPFL TALENVMLAQ
HYHSVVDEAA AQRVLDQVGL AHRVNHLPSQ LSGGEQQRVC IARALVNEPP VIFADEPTGN
LDEENEQRVL DLLKDLHRQG RTIVMVTHNP ELGRFADRII RLQHGKYFGE EVNHHEMA
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