Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1313 |
Symbol | |
ID | 8132251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1530503 |
End bp | 1531465 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644864603 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003016896 |
Protein GI | 253687706 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAC GCGTTTATGT TGCTGGCCAT CGAGGTATGG TCGGCTCTGC AATTGTGCGG CAGCTCCAGA CAAGAAATGA TATCGAGATA GTTGTCCGCA CACGTGATGA GTTGGATCTC ACATCGCAGA ATGCAGTAAG AGATTTCTTT GCCGAAGAAA ATATTGATGA AGTTTACCTC GCTGCTGCGA AAGTGGGGGG GATTCATGCG AATAATACTT ATCCGGCAGA ATTTATTTAT GAGAACTTAA TGATTGAAAG CAATATCATA AATTATGCGC ATCAATCAGG TGTGAATAAA TTGCTTTTTT TAGGTTCTTC ATGCATTTAT CCTAAACTTG TTGAACAGCC GATGAAAGAG TCGGCTTTAT TAACAGATGT TTTGGAGGCG ACAAATGAGC CTTATGCGAT TGCTAAAATA GCAGGGATAA AATTATGCGA GTCATATAAT CGACAGTACG GTAGAGATTA TCGTAGCGTA ATGCCGACTA ATCTTTATGG GGAAAATGAT AACTTCCACC CCGAAAACTC GCATGTTATT CCGGCGTTAA TGCGTCGTTT TCATGAAGCT AAAGTTTCAA ACGCTCCTGA GGTTGTTGTA TGGGGGAGTG GTAAGCCGAT GCGAGAGTTT TTGTTTGTGG ATGATATGGC ATCAGCATCA ATTCACGTGA TGGAATTGGA TAAGACTGTC TATGACTCTC ATACTGATCC TATGCTGTCA CATATCAATG TTGGGACTGG CGTTGATTGC ACTATCGGTG AAATGGCTAA CACAATGGCG AAAGTGGTTG GATACCAAGG TAACGTGGTA TTCGACGCCA GTAAACCTGA TGGTACACCA AGAAAATTAA TGGATGTCTC CAGATTAAAA CAATTAGGAT GGCAATATAA AATAGAATTA GAAGAAGGGT TGTTAAAAAC ATACAACTGG TTCTTAGCTA ATCAAAGTTC TTTTAGGAAA TAA
|
Protein sequence | MKKRVYVAGH RGMVGSAIVR QLQTRNDIEI VVRTRDELDL TSQNAVRDFF AEENIDEVYL AAAKVGGIHA NNTYPAEFIY ENLMIESNII NYAHQSGVNK LLFLGSSCIY PKLVEQPMKE SALLTDVLEA TNEPYAIAKI AGIKLCESYN RQYGRDYRSV MPTNLYGEND NFHPENSHVI PALMRRFHEA KVSNAPEVVV WGSGKPMREF LFVDDMASAS IHVMELDKTV YDSHTDPMLS HINVGTGVDC TIGEMANTMA KVVGYQGNVV FDASKPDGTP RKLMDVSRLK QLGWQYKIEL EEGLLKTYNW FLANQSSFRK
|
| |