| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1246 |
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| Symbol | |
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| ID | 8132181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1454671 |
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| End bp | 1455357 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864534 |
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| Product | colicin uptake protein TolQ |
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| Protein accession | YP_003016830 |
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| Protein GI | 253687640 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0152271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACTGACA TGAACGTTTT TGATTTGTTC CTGAAGGCAA GCCTTCTGGT CAAACTAATC
ATGCTGATTT TAATCTGTTT TTCTATCGCT TCCTGGGCGA TCATTATTCA ACGTACCCGC
ATTCTGAATG CGGCGACGCG TGAGGCTGAA GCGTTCGAAG ACAAATTCTG GTCTGGCATC
GAACTGTCAC GTCTCTATCA GGAAAGCCAA AGTCGTCGCG ATAGCCTGAC GGGCACTGAA
CAAATCTTCC ATTCAGGTTT CAAAGAATTT GCACGGCTGC ATCGTGCTAA CAGTCATGCG
CCGGAAGCCG TGGTGGAAGG GGCGTCCCGC GCAATGCGTA TTTCGATGAA CCGTGAATTG
GAAACGCTGG AAACGCACAT TCCTTTCTTG GGTACCGTTG GTTCTATCAG TCCGTATATC
GGCCTGTTCG GTACCGTTTG GGGGATTATG CATGCCTTCA TCGCGCTGGG TGCCGTGAAG
CAGGCAACCT TACAGATGGT TGCCCCTGGT ATTGCCGAAG CCTTGATTGC CACAGCGATC
GGCCTGTTTG CAGCGATTCC TGCGGTCATG GCGTATAACC GCCTGAGCCT GCGGGTGGGC
AAATTGGAGC AGAACTACGA CAACTTTACC GAAGAGTTCA TCGCGATCCT GCACCGTCAG
GCGTTCTCCA GCGACAACAG CAAGTAA
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| Protein sequence | MTDMNVFDLF LKASLLVKLI MLILICFSIA SWAIIIQRTR ILNAATREAE AFEDKFWSGI
ELSRLYQESQ SRRDSLTGTE QIFHSGFKEF ARLHRANSHA PEAVVEGASR AMRISMNREL
ETLETHIPFL GTVGSISPYI GLFGTVWGIM HAFIALGAVK QATLQMVAPG IAEALIATAI
GLFAAIPAVM AYNRLSLRVG KLEQNYDNFT EEFIAILHRQ AFSSDNSK
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