| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1237 |
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| Symbol | |
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| ID | 8132172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1445409 |
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| End bp | 1446632 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864525 |
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| Product | dihydrolipoamide succinyltransferase |
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| Protein accession | YP_003016821 |
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| Protein GI | 253687631 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCG TAGATATTCT TGTACCCGAC CTGCCTGAAT CCGTCGCTGA CGCCACTGTT
GCGACCTGGC ATAAAAAACC AGGCGATAGC GTTCAGCGCG ATGAAGTACT GGTTGAAATT
GAAACTGACA AAGTTGTACT GGAAGTGCCT GCCTCTGAAG CTGGCATTCT GGATGCCGTG
CTGGAAGAAG AAGGCGCTAC GGTAACGTCT CGCCAGTTGC TGGGCCGCAT CCGCCGTGGC
GACAGCTCTG GTAAAGAAAC CAGTGAGAAG TCACAGAGCA AAGAATCAAC ACCGGCACAG
CGTCATACCG CTGGGCTGGA AGAAGAGAAT AGCGATGCGC TTAGCCCGGC GATCCGCCGT
CTGATTGCCG AGCACGATCT CGATGCTTCT GCGATCAAAG GCAGCGGTGT AGGCGGTCGA
ATTACTCGTG AAGACGTCGA TAAGTATTTG GCTGCTCAGA AGAAAGAATC TGGCAAAGCG
GTTAAGTCTG AGGCTCCGGC TGCTCCGGCA CCGGCTTTGG GTGCGCGCAG TGAAAAACGC
GTACCGATGA CGCGCCTGCG TAAGCGTGTT GCAGAGCGCC TGCTGGAAGC GAAAAACAGC
ACGGCCATGT TGACGACGTT CAACGAAATC AACATGCAAC CCATTATGGA TCTGCGCAAG
CAATACGGCG AAGCGTTTGA GAAACGTCAT GGTGTGCGTC TGGGCTTTAT GTCCTTCTAC
ATCAAAGCCG TGGTTGAAGC GCTGAAGCGT TACCCTGAAG TAAATGCCTC TATTGATGGC
GAAGATGTGG TTTACCACAA CTATTTCGAT GTCAGCATTG CGGTTTCTAC TCCGCGCGGC
CTGGTTACGC CAGTACTGCG TGATGTGGAT GCGCTGGGTA TGGCCGACAT TGAGAAACGT
ATCAAAGATC TGGCCGTGAA AGGTCGTGAC GGCAAACTGA CGGTTGAAGA ACTGCTGGGC
GGTAACTTCA CGATTACCAA CGGCGGCGTC TTTGGTTCTC TGATGTCTAC CCCGATCATC
AACCCACCGC AGAGTGCGAT TCTGGGTATG CACGCCATTA AAGATCGCCC GATGGCGGTG
GATGGTCAGG TTGTCATTCT GCCGATGATG TATCTGGCGC TGTCTTACGA TCACCGTTTG
ATCGACGGTC GTGAGTCCGT TGGCTTCCTG GTGACGGTGA AAGAGATGCT GGAAGATCCA
GCGCGTCTGC TGTTAGACGT TTAG
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| Protein sequence | MSSVDILVPD LPESVADATV ATWHKKPGDS VQRDEVLVEI ETDKVVLEVP ASEAGILDAV
LEEEGATVTS RQLLGRIRRG DSSGKETSEK SQSKESTPAQ RHTAGLEEEN SDALSPAIRR
LIAEHDLDAS AIKGSGVGGR ITREDVDKYL AAQKKESGKA VKSEAPAAPA PALGARSEKR
VPMTRLRKRV AERLLEAKNS TAMLTTFNEI NMQPIMDLRK QYGEAFEKRH GVRLGFMSFY
IKAVVEALKR YPEVNASIDG EDVVYHNYFD VSIAVSTPRG LVTPVLRDVD ALGMADIEKR
IKDLAVKGRD GKLTVEELLG GNFTITNGGV FGSLMSTPII NPPQSAILGM HAIKDRPMAV
DGQVVILPMM YLALSYDHRL IDGRESVGFL VTVKEMLEDP ARLLLDV
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