| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1235 |
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| Symbol | sdhB |
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| ID | 8132170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1441611 |
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| End bp | 1442327 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864523 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_003016819 |
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| Protein GI | 253687629 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCG AATTTTCTAT TTATCGTTAC AACCCGGATG TTGACGATGC TCCGCGGATG
CAGGATTACC AGTTGGAAGC GGAAGAAGGC CGCGACATGA TGCTGCTGGA TGCGCTTATG
TTGCTGAAAG AGCAGGATCC GACACTGTCA TTCCGTCGTT CCTGCCGTGA AGGCGTCTGC
GGATCCGATG GCGTTAACAT GAACGGCAAA AACGGGCTGG CCTGTATTAC GCCAGTTTCC
GCGTTACGTC GCGGAAACAG CAAAATTGTT ATCCGTCCTT TACCTGGATT ACCGGTTGTA
CGTGATTTGG TAGTGGACAT GGGACAGTTC TATGCCCAAT ATGAGAAAAT AAAGCCTTAC
CTGTTGAATA ATGGGAAAAA TCCGCCGGCG CGTGAGCATC TGCAATCGCC CGATCAACGC
GCCAAGCTGG ATGGGTTGTA TGAATGCATC ATGTGCGCCT GCTGTTCAAC GTCTTGTCCG
TCGTTCTGGT GGAACCCAGA TAAGTTTGTT GGGCCTGCGG GGCTGTTGGC GGCTTATCGT
TTCCTGATCG ACAGTCGCGA TACGGAAACC AAGCCACGAC TGGACGAGCT GGACGATGCG
TTCAGCGTCT TCCGCTGCCA CGGCATCATG AACTGTGTGA ACGTGTGTCC GAAAGGGCTG
AACCCGACCA AGGCTATCGG TCATATTAAA TCGATGCTGT TGCACCGCAG CGCGTAA
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| Protein sequence | MKLEFSIYRY NPDVDDAPRM QDYQLEAEEG RDMMLLDALM LLKEQDPTLS FRRSCREGVC
GSDGVNMNGK NGLACITPVS ALRRGNSKIV IRPLPGLPVV RDLVVDMGQF YAQYEKIKPY
LLNNGKNPPA REHLQSPDQR AKLDGLYECI MCACCSTSCP SFWWNPDKFV GPAGLLAAYR
FLIDSRDTET KPRLDELDDA FSVFRCHGIM NCVNVCPKGL NPTKAIGHIK SMLLHRSA
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