| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1233 |
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| Symbol | sdhD |
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| ID | 8132168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1439481 |
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| End bp | 1439828 |
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| Gene Length | 348 bp |
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| Protein Length | 115 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644864521 |
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| Product | succinate dehydrogenase cytochrome b556 small membrane subunit |
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| Protein accession | YP_003016817 |
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| Protein GI | 253687627 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit |
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| TIGRFAM ID | [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAAGCA ATGCTTCTGC GTTAGGACGC AATGGCGTAC ACGATTGGTT ACTGATTCGC
GCTTCCGCCA TCGTCATTGT TCTGTATGTA ATTTATATCA TTGGTTTTAT TGCTACGGCT
GGCGATATCA CGTATGAAAT CTGGCGTGGT TTCTTCTCGA TGGCTCTCAC CAAAGTATTC
ACACTGCTAA CGTTATTTTC CATTCTGGTT CATGCCTGGA TAGGGATGTG GCAAGTGCTG
ACCGACTACA TTAAACCGCT GGCCTTACGC CTGACTTTAC AGTTGGCGAT TGTCGTAGCG
CTGTTGGTGT ACGTCATTTA TGGAACTATT GTGGTGTGGG GTGCGTGA
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| Protein sequence | MVSNASALGR NGVHDWLLIR ASAIVIVLYV IYIIGFIATA GDITYEIWRG FFSMALTKVF
TLLTLFSILV HAWIGMWQVL TDYIKPLALR LTLQLAIVVA LLVYVIYGTI VVWGA
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