| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1201 |
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| Symbol | |
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| ID | 8132136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1401207 |
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| End bp | 1402430 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864489 |
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| Product | ROK family protein |
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| Protein accession | YP_003016785 |
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| Protein GI | 253687595 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0872056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAG GCGGACAGGC GCAGATAGGG AATGTCGATC TGGTTAAGCA ATTAAACAGT
GCGGTGGTTT ACCGCCTGAT TGACCAGCAA GGCCCAATCT CACGAATTCA GATAGCAGAA
CAGAGCCAGC TTGCACCTGC CAGCGTCACG AAAATCACCC GCCAGCTTCT GGAACGCGGG
CTAATCAAAG AAGTCGATCA GCAGGCCTCC ACAGGTGGCA GGCGTGCCAT TTCGATTATC
ACCGAAAATC GCCCTTTCCA TTCTATCGCC GTCCGTCTCG GTCGTTACGA CGCCACCATT
GCGCTTTACG ATTTGCAAGG CAAAGCGCTG GAAGAAACGC ACTACGACCT GCAGGAGAAA
ACGCAGGAGG CGCTGGAAGC CGCACTTTTT CAGGCGATCG GCGGCTTTAT CGCCAGCCAT
CAGCGCCGCA TTCGCGAACT CATTGCGATC TCCGTTGTGC TGCCGGGGCT GGTTGATCCG
GTGGCGGGTA TTGTCCGCTA TATGCCGCAC ATCAGCGTGG ATAACTGGCA ACTGGTCGAA
AATCTGCAGC GCCAGTTCAA CGTTACCAGC TTTGTCGGTC ACGACATCCG CAGCCTGGCG
CTGGCAGAAC ACTATTTCGG CGCCACCCAC GACTCGCTGG ATTCCATTCT GGTGCGCGTC
CATCGGGGTA CTGGCGCGGG TATTCTCGTC AACGGGCAAA TTTTTCTCGG CAGCAACGGC
AACGTCGGCG AGATCGGCCA TATTCAGATC GACCCACTTG GCGATCGCTG CCACTGCGGC
AATTTCGGCT GTCTGGAAAC CGTCGTTGCC AATGCCGCCA TTGAACAGCG GGTACAGCAT
CTGCTGCGTC AGGGTTACCC CAGCAAGCTT TCTACAGATA CCCCGACGAT TTCTGCCATT
TGCAAAGCGG CAAATCGGGG CGACGCCCTC GCCCGTGAGG TGATCGAACA GGCTGGGATC
AACCTTGGTA AAGCGCTTTC CATCGCAATC AACCTCTTCA ATCCTCAGAA AGTTGTGATT
GCCGGTGAAA TTACCGAAGC AGAAAAAACG CTGCTTCCTG CGATCCAGCG CTGTATCAAC
ACGCAAGTGC TGAAAGAATT TCGTCATAAC CTGCCGATTG AGATCTCCAG CCTCAATCAT
CTTTCCGCTA TCAGCGCATT TGCCTTGGTC AAACGTGCAA TGCTAAACGG CGTGCTACTA
CAGCAATTAC TCGAAAATGC CTGA
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| Protein sequence | MTTGGQAQIG NVDLVKQLNS AVVYRLIDQQ GPISRIQIAE QSQLAPASVT KITRQLLERG
LIKEVDQQAS TGGRRAISII TENRPFHSIA VRLGRYDATI ALYDLQGKAL EETHYDLQEK
TQEALEAALF QAIGGFIASH QRRIRELIAI SVVLPGLVDP VAGIVRYMPH ISVDNWQLVE
NLQRQFNVTS FVGHDIRSLA LAEHYFGATH DSLDSILVRV HRGTGAGILV NGQIFLGSNG
NVGEIGHIQI DPLGDRCHCG NFGCLETVVA NAAIEQRVQH LLRQGYPSKL STDTPTISAI
CKAANRGDAL AREVIEQAGI NLGKALSIAI NLFNPQKVVI AGEITEAEKT LLPAIQRCIN
TQVLKEFRHN LPIEISSLNH LSAISAFALV KRAMLNGVLL QQLLENA
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