| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1197 |
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| Symbol | |
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| ID | 8132126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1394910 |
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| End bp | 1396334 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864479 |
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| Product | tRNA-i(6)A37 thiotransferase enzyme MiaB |
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| Protein accession | YP_003016781 |
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| Protein GI | 253687591 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.02988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAA AACTGCTTAT TAAAACCTGG GGCTGTCAGA TGAATGAGTA CGATTCATCA
AAGATGGCTG ATTTACTGGG AAGTACGCAC GGCTATGAGC TGACTGAAAT CGCTGAAGAA
GCCGATGTCC TGCTGCTCAA TACCTGTTCG ATCCGTGAAA AGGCGCAGGA AAAGGTCTTC
CATCAACTTG GCCGTTGGAA AGCGCTGAAA GATCTCAATC CGAATTTGAT TATTGGTGTG
GGTGGCTGCG TCGCCTCACA GGAAGGCGCG CATATTCGTG AACGTGCGCA CTATGTTGAC
GTTATTTTTG GCCCACAAAC CCTGCACCGT CTGCCGGAAA TGATTAACCA CGTTCAGGGC
ACACGCAGCC CTATCGTTGA TATCAGTTTC CCTGAAATCG AGAAATTTGA CCGTCTGCCA
GAACCACGTG CCGAAGGACC AACGGCATTC GTCTCCATCA TGGAAGGTTG CAATAAATAT
TGCACATTCT GCGTGGTGCC TTATACCCGT GGGGAAGAAG TCAGCCGCCC GTGTGATGAT
GTTTTGTTTG AAATCGCTCA ACTGGCAGCG CAAGGCGTAC GTGAAGTCAA CCTACTGGGA
CAGAACGTTA ACGCCTATCG CGGCGAAACT TATGACGGTG AAATTTGTTC TTTTGCCGAA
CTGCTGCGTC TGGTCGCCGC TATTGACGGG ATCGACCGTA TCCGTTTTAC CACCAGCCAT
CCCATTGAAT TCACAGATGA CATTATCAGC GTCTATGAAG ACACGCCCGA ACTGGTCAGC
TTCCTGCATT TACCGGTGCA AAGCGGTTCT GACCGCGTGC TGACGATGAT GAAACGCCGC
CATACCGCGC TGGAATACAA AGCGATTATC CGTAAGCTGC ATAACGCGCG TCCGGGCATC
CTGATCAGTT CTGACTTTAT CGTCGGCTTC CCTGGCGAAA CGCAGGCTGA CTTTGAACAA
ACGATGAAGC TGATTGCCGA TGTGAATTTC GATATGAGCT ACAGCTTTGT CTATTCCGCC
CGTCCGGGAA CACCGGCTGC GGACATGGTC GATGACGTGC CGGAAGAAGA GAAAAAGCAG
CGTTTGTACC TTCTGCAAGA GCGCATCACG CAGCAGGCAA TGCGCTTCAG CCGCCTCATG
TTGGGTACCG TCCAGCGTAT TCTGGTGGAA GGTACCTCGC GTAAGAGCGT GATGGAGCTG
TCTGGCCGTA CGGAAAATAA CCGCGTCGTC AACTTCGAAG GCACGCCTGA TATGATCGGT
AAATTCGTCG ATGTAGAAAT CGTTGATGTT TATACCAATT CCCTGCGTGG TATCGTCGTG
CGCACCGAAG ATCAAATGGA TCTGCGCGTC CATGAGTCAC CGTCTTCCGT GATTGCGCGT
ACCCGCAAAG AGAATGAAAT CGGCGTTGGG TTCTACCAGC CGTAA
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| Protein sequence | MTKKLLIKTW GCQMNEYDSS KMADLLGSTH GYELTEIAEE ADVLLLNTCS IREKAQEKVF
HQLGRWKALK DLNPNLIIGV GGCVASQEGA HIRERAHYVD VIFGPQTLHR LPEMINHVQG
TRSPIVDISF PEIEKFDRLP EPRAEGPTAF VSIMEGCNKY CTFCVVPYTR GEEVSRPCDD
VLFEIAQLAA QGVREVNLLG QNVNAYRGET YDGEICSFAE LLRLVAAIDG IDRIRFTTSH
PIEFTDDIIS VYEDTPELVS FLHLPVQSGS DRVLTMMKRR HTALEYKAII RKLHNARPGI
LISSDFIVGF PGETQADFEQ TMKLIADVNF DMSYSFVYSA RPGTPAADMV DDVPEEEKKQ
RLYLLQERIT QQAMRFSRLM LGTVQRILVE GTSRKSVMEL SGRTENNRVV NFEGTPDMIG
KFVDVEIVDV YTNSLRGIVV RTEDQMDLRV HESPSSVIAR TRKENEIGVG FYQP
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