Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1193 |
Symbol | lnt |
ID | 8132122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1390419 |
End bp | 1391948 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644864475 |
Product | apolipoprotein N-acyltransferase |
Protein accession | YP_003016777 |
Protein GI | 253687587 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0815] Apolipoprotein N-acyltransferase |
TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGTCG CTTCTTTTCT ACAACGCCAG CAGGTCAGAG CCCTGCTGGC GCTCTTATTT GGTGCCTGTG GCACGCTGGC ATTTTCTCCC TTTGACTTCT GGCCCGCGGC GATTATCTCG CTCATGGGCC TACAGGCGCT GACACTAAAC CGTACTAGCC GCCAGTCAGC CTGGATAGGC TTTTGCTGGG GGTTCGGCCT ATTTGGCAGC GGCATTAACT GGGTTTACGT CAGTATCGCG CAATTTGGTG GGATGCCGGG TCCTGTAAAC ATTGCACTGG TCATTCTGCT CGCGGCTTAT TTATCGCTCT ATCCGCTACT GTTTGCTGCC CTGCTCTCAC GCCTCAGCCC GAAGACAACG CTGTGGCGTC TGGCACTGGC CGCCCCCGTG CTTTGGCAAT TAACCGAATT TTTACGCGGC TGGGTGCTGA CGGGCTTTCC GTGGCTACAA TTCGGCTACA GCCAGATTGA CGGCCCGCTA AAAGGTATTG CGCCCATTCT GGGTATCGAC ACCATCACCT TCCTGTTGAT GAGTCTCAGC GGGCTACTCG TTTATGCCAT CACTCAACGC AAAGTCGTTC CGGCGGCCAT TGCTATCGCT GTTTTCGTTT TATCATGGCC GCTGCGCAAC GTGCAGTGGT ATACCCTGCA ACCTGAACGC GCCGTCAATG TCGCACTGGT ACAGGGCGAT ATCCCGCAGG CCATGAAATG GGAACAAGAT GAGCTATTGA ACACGCTGAA GATCTATCTG GATAACAGCC TGCCTTATAT GGACAAGGCA CCTATCGTGA TCTGGCCGGA AACGGCGATT CCTGATATTG AAAGTCGTCA GGGCGCTTAT CTGAAACAGG TTGACGATAT CTTGCGTAGC CACAATAGCA GCCTGATTAC AGGTATCGTC GATATCCGGC GTGAGGGTAA CAAAACCGAT TTTTATAACT CGGTTATCGT GTTGGGCGAC AAAGATCCGT ACCACTACCC TACAACGAAC CGTTACAACA AAAACCATCT GGTGCCTTTT GGCGAGTTTG TCCCGTTGGA AACGCTGTTA CGCCCGCTGG CGCCGTTCTT CGATCTTCCT ATGTCATCGT TCAGCCGGGG AGACTACGTC CAGCCTCAGC TCTCGGTTCA TGGCTTCAAG CTTAATGCCG CCATTTGCTA TGAGATTATC TTAGGCCAAC AGTTGCGGGA TAACTTCCGG CCAGACACCG ATATGTTGCT GACTATCTCG AACGATGCCT GGTTCGGTCA TTCAATTGGA CCGTGGCAGC ATTTCCAGAT GGCACGCATG CGCGCGTTGG AATTAGGACG TCCCCTGGTT CGGAGTACCA ATAACGGCGT CACCGCGGTG ATTACACCTG ATGGCAATGT CAGCGCCAGC CTGCCGCAGT TTACGCGTGC GGTGCTGAGC ACACAGGTTG TGCCCGCTAC CGGAATCACA CCTTATGCAC GTTTCGGTTC CTGGCCGCTC TGGATCATCA CGTTATTCGG CGGCATCGTT ACCGTTCTCT TCGGTTTGCG TCGCCGATAA
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Protein sequence | MVVASFLQRQ QVRALLALLF GACGTLAFSP FDFWPAAIIS LMGLQALTLN RTSRQSAWIG FCWGFGLFGS GINWVYVSIA QFGGMPGPVN IALVILLAAY LSLYPLLFAA LLSRLSPKTT LWRLALAAPV LWQLTEFLRG WVLTGFPWLQ FGYSQIDGPL KGIAPILGID TITFLLMSLS GLLVYAITQR KVVPAAIAIA VFVLSWPLRN VQWYTLQPER AVNVALVQGD IPQAMKWEQD ELLNTLKIYL DNSLPYMDKA PIVIWPETAI PDIESRQGAY LKQVDDILRS HNSSLITGIV DIRREGNKTD FYNSVIVLGD KDPYHYPTTN RYNKNHLVPF GEFVPLETLL RPLAPFFDLP MSSFSRGDYV QPQLSVHGFK LNAAICYEII LGQQLRDNFR PDTDMLLTIS NDAWFGHSIG PWQHFQMARM RALELGRPLV RSTNNGVTAV ITPDGNVSAS LPQFTRAVLS TQVVPATGIT PYARFGSWPL WIITLFGGIV TVLFGLRRR
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