| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1185 |
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| Symbol | holA |
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| ID | 8132114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1381555 |
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| End bp | 1382580 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864467 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_003016769 |
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| Protein GI | 253687579 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.37813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCGGC TTTACCCCGA GCAACTGACC GCGCAGCTCC ATGAGGGGCT GCGCGGTTGT
TATTTGGTCT TCGGGTCAGA CCCACTCCTG CTACAGGAAA GCCTCGATAG CATCAAACGG
GTCGCTCAAC AGCACGAGTT CAGCGAACAT TTCAGCTTCA TTCTGGATCC TCATACCGAC
TGGGATGCGA TTTTCAGCAC CTGTCAGGCG CTCAGCCTGT TTGCTTCACG CCAATCGCTC
TTACTAATCT TGCCGGAAAA TGGCCCAAAT GCCGCGATGA GCGAAAATCT GGTCAAGCTT
TCCGGGCTAT TGCATCCCGA TATTTTGCTG ATTTTGCGCG GTCATAAGCT GACCAAAGCG
CAGGAAAACA GCGCCTGGTT CAAAGCACTC GCGCAAGACA GCGTCTATAT CAATTGTCTG
ACGCCAGAAC AGGCACAGCT TCCCCGCTGG GTTTCACAGC GCGCCAAATC CATGAAGTTG
ACGCTGGATG AACAGGCTAC GCAGCTCATT TGCTATTGCT ATGAAGGCAA TCTTCTTGCG
CTGTCTCAGG CGTTAGAACG GCTGTCGCTG CTATACCCCG ATGGTAAGCT GACCCTGCCG
CGTGTGGAAA GCGCAGTCAA TGATGCCGCC CACTTCACGC CGTTCCACTG GCTCGATGCG
CTGCTGGCAG GGAAAAGCAA ACGCGCCTGG CACATTTTGC AGCAGCTACA GCAGGAAGAT
TGCGAACCGG TTATTTTGCT GCGCACACTA CAGCGTGAGT TGCTACAACT GTTGGCGCTG
AAGCGGCGTA TGTCAGACAC GCCGCTGCGT ACGTTATTCG ATCAGCAAAA GGTGTGGCAA
AACCGGCGTG ACCTGCTCAC TCAGGCATTA CAGCGGCTGT CTCTGCAACA GCTACAGCAG
GCTGTGCGAT TGCTGACGCA GGTGGAAATA ACGCTAAAAC AAGACTACGG TCAGCCCGTC
TGGTCTGAAC TTGAATCGCT TGCCATGCTG CTGTGCGGCA AAGCATTACC GGAGGCATTC
ATCTGA
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| Protein sequence | MIRLYPEQLT AQLHEGLRGC YLVFGSDPLL LQESLDSIKR VAQQHEFSEH FSFILDPHTD
WDAIFSTCQA LSLFASRQSL LLILPENGPN AAMSENLVKL SGLLHPDILL ILRGHKLTKA
QENSAWFKAL AQDSVYINCL TPEQAQLPRW VSQRAKSMKL TLDEQATQLI CYCYEGNLLA
LSQALERLSL LYPDGKLTLP RVESAVNDAA HFTPFHWLDA LLAGKSKRAW HILQQLQQED
CEPVILLRTL QRELLQLLAL KRRMSDTPLR TLFDQQKVWQ NRRDLLTQAL QRLSLQQLQQ
AVRLLTQVEI TLKQDYGQPV WSELESLAML LCGKALPEAF I
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