Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1180 |
Symbol | |
ID | 8132109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1376855 |
End bp | 1377967 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644864462 |
Product | cell wall shape-determining protein |
Protein accession | YP_003016764 |
Protein GI | 253687574 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0772] Bacterial cell division membrane protein |
TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0230726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATA GCCAACAAAA GGGATCGTTC TGGGCGAAAA TCCACATCGA CCTCCCGTTT CTTCTCTGCA TCCTGGCACT GCTGGGCTAT AGCCTATTTG TCTTATGGAG CGCCAGCGGG CAAGACGTCG GTATGATGGA ACGAAAAGTC GTTCAAATCG TACTAGGGTT TACGGTGATG ATCGTGATGG CGCAAATCCC TCCCCGCGTG TATGAGGGCT GGGCTCCCTA CCTCTACGTA TTCTGCGTAA TTTTGCTGCT CATCGTGGAT ATTTTCGGAC AGATTAGTAA AGGCGCGCAG CGCTGGCTGG ATCTGGGCTT TATCCGTTTC CAACCGTCGG AAATTGCCAA GATCGCCGTA CCGCTAATGG TCGCGCGTTT TATTAACCGT GATATGTGCC CGCCATCGCT AAAAAATACG GCAATCGCAC TGGTGCTGAT TTTTGTCCCT ACGCTGCTGG TTGCCGCCCA GCCGGATTTA GGCACCTCGA TTCTGGTCGC GCTCTCAGGG CTGTTTGTGC TTTTCCTCGC GGGTATGAGC TGGCGCTTGA TTGGTATCGC CGTCCTGCTA CTCGCCGCTT TTATTCCTAT ACTCTGGTTT TTCCTGATGC ATGATTATCA GCGCGCCAGG GTCATGATGC TACTCGATCC AGAAAGCGAC CCGCTTGGTG CCGGATACCA TATTATTCAG TCGAAAATTG CGATAGGCTC GGGTGGCCTG TCTGGAAAAG GTTGGCTGCA CGGCACACAG TCTCAGTTAG AGTTTCTGCC AGAACGCCAC ACCGACTTTA TCTTTGCCGT ACTGTCAGAA GAGCTCGGCT TAATCGGCGT CTTGATTCTG CTCGCCATGT ATCTGTTCAT GATCATGCGC GGTCTGGTCA TTGCTGCTAA TGCGCAAACC TCGTTCGGCC GAGTGATGGT CGGCGGGCTG ATGCTGATTC TGTTTTTCTA TGTTTTCGTC AATATCGGGA TGGTCAGCGG TATACTTCCC GTCGTTGGCG TGCCGCTGCC GCTAATCAGC TATGGTGGCT CGGCGCTGGT CGTCTTAATG GCGGGGTTCG GTATCGTCAT GTCGATACAT ACTCACCGCA AACTGCTATC CAAAAATTTA TAA
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Protein sequence | MTDSQQKGSF WAKIHIDLPF LLCILALLGY SLFVLWSASG QDVGMMERKV VQIVLGFTVM IVMAQIPPRV YEGWAPYLYV FCVILLLIVD IFGQISKGAQ RWLDLGFIRF QPSEIAKIAV PLMVARFINR DMCPPSLKNT AIALVLIFVP TLLVAAQPDL GTSILVALSG LFVLFLAGMS WRLIGIAVLL LAAFIPILWF FLMHDYQRAR VMMLLDPESD PLGAGYHIIQ SKIAIGSGGL SGKGWLHGTQ SQLEFLPERH TDFIFAVLSE ELGLIGVLIL LAMYLFMIMR GLVIAANAQT SFGRVMVGGL MLILFFYVFV NIGMVSGILP VVGVPLPLIS YGGSALVVLM AGFGIVMSIH THRKLLSKNL
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