| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1151 |
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| Symbol | |
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| ID | 8132080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1344873 |
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| End bp | 1345394 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864433 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_003016735 |
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| Protein GI | 253687545 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACACAG AGGCTGTTAA AAAACCCGAC TTGCTGTCGC TGATATTTCG CAGCGATTAT
CGCTGGCTAA CGGAAAAATT ACGCCGCCGC ATTGCCTATG GCTGTGAAGC GGAAGATGTC
GCTTCCGAGG CCTTTCTGCG TTTAGCCTCT CTGCCGAATC TCGCCAACGT ACAAGAACCG
CGCGCGATGT TAACGACACT CGCCAAACGC GTGCTGTATG AAAACTGGCG TCGGCGCGAT
CTGGAAAAAG CCTACCTCAC CGCACTGGCG AGCAAACCGG AGTTTCACCA TCCGTCACCG
GAAGAGCAAC AGCTGTTGAT GGAGGCGCTG CTTACTATCG ATCAGGCGCT GGATGGACTC
TCCATCAAAG CACGACAGGC CTTTCTGTTC AGCCAGCTTG ATGGCATGAC CTATGCGGAT
ATTGCCGTAC AGCTCGATGT CTCCGTCAGT ATGGTCAGAA AATACATCGC CAAAGCGCTG
ACCAATTGCT ATTTGGCCAC GCAGGACAGC AGTGATTTAT AG
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| Protein sequence | MYTEAVKKPD LLSLIFRSDY RWLTEKLRRR IAYGCEAEDV ASEAFLRLAS LPNLANVQEP
RAMLTTLAKR VLYENWRRRD LEKAYLTALA SKPEFHHPSP EEQQLLMEAL LTIDQALDGL
SIKARQAFLF SQLDGMTYAD IAVQLDVSVS MVRKYIAKAL TNCYLATQDS SDL
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