| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1149 |
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| Symbol | |
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| ID | 8132078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1342871 |
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| End bp | 1343752 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644864431 |
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| Product | TonB family protein |
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| Protein accession | YP_003016733 |
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| Protein GI | 253687543 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAACAGG CATCCGTGCA ACACTTTTCG TTAAACGCGC GCGTTGATGC GGCTCCCGCC
GCACGGCATG ACGTCTCCCC CGCCCAGTCG CCGCGCAACA TGGTGGCGGC AGCACCTGTT
CGGGGAGAAA TGGGGAAGAT AGCGCTCAGC TTTCTGACCG TCGCACTCAT CCATGCGGGT
GTCGCCGCCC TGCTCATCAC TCGTACGACC GAATACACCC CGATCAATCT GCTTAATCCG
GCCGCCAGCG TGAGCATTCA GGCCACGATG GTGGAAGCGC CAGAACCTGA GCCTATTCCC
GAACCGTCGC CGGAGTCACC TGTGCTGACG TCAGAACAGG GAGAACGCGA GATTGCATCG
GTTCCCGAAA AAGCGATCGT TGAGGAACAG CAAACGCCGC CACCGCCGGT CAAAAAGGAA
GTTCACCAGC CGCCTGTGAA GCCCGTGGTA AAACCACAGC CTGTCCGCCC AAAAACGACC
GCCGAACGTC AGCCTGCGGC ACGTCCAGCG CCGGAGCCTT CTCCCGCGGC ACCGGAAGCG
ACGCCAGGCC AGTTGACGCT CGCCAGCAAG GGCAACCTGA TGCAGAACAA TCCAGGCGCA
CAGCCTAAAC AGGTCGCCTC CGTCGGTTGC GTCGTCCCGC AGCCTGATTA CCCTCGCCGC
GCTAAACGTC TTCAGCAGGA AGGCGACGTA CTGGTACGGC TGGTGATTAA CCCGGAAGGA
CGTTTGATTC GGCATGACAT CGCCCGCAGC AGCGGCTATG ACGCGCTCGA TCAGGCCGCA
GTTGAGGCCG TAGCGCAGGC GCGCTGTACG CCTTATCGCG AAAATGGACA GGCCATTACC
GTCATGACGA TCCAGCCCGT CAATTTCCGG CTGGCTCGCT AA
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| Protein sequence | MQQASVQHFS LNARVDAAPA ARHDVSPAQS PRNMVAAAPV RGEMGKIALS FLTVALIHAG
VAALLITRTT EYTPINLLNP AASVSIQATM VEAPEPEPIP EPSPESPVLT SEQGEREIAS
VPEKAIVEEQ QTPPPPVKKE VHQPPVKPVV KPQPVRPKTT AERQPAARPA PEPSPAAPEA
TPGQLTLASK GNLMQNNPGA QPKQVASVGC VVPQPDYPRR AKRLQQEGDV LVRLVINPEG
RLIRHDIARS SGYDALDQAA VEAVAQARCT PYRENGQAIT VMTIQPVNFR LAR
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