| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1109 |
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| Symbol | |
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| ID | 8132038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1298379 |
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| End bp | 1299548 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864391 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003016693 |
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| Protein GI | 253687503 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0848827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAA CACTGAATTC CAACCCGTTA TGCGTCAATC AGCCTCTGCC GGGCAAAAAG
GCACAGACAG CGACGCGCAT CGTTTTCTTT GTTGCGGGTT TCGCCATGGC CTCCTGGGCA
CCGCTGGTGC CATTTGTCAA AACGCGGCTG GCTATCAGTG ATGCCTCTCT GGGGATGTTG
CTACTTTCTC TTGGTATTGG TTCGCTGCTG GCTATGCCGC TCACCGGTTT CCTCACCAGC
AAGCTAGGGT GTCGCAGCGT TATTTTGCTG GCAAGCGCAC TGCTTTGTCT GATATTGCCC
GCGTTGACGC AGGCAGGCAC ATTGCCCGTG ATGGCGATAA CGCTGCTCTT TTTCGGCGCG
TCTATCGGCA TGATCGATGT TGCGATGAAT ATTCAGGCCG TCATCGTAGA ACGTGCCAGC
GGTCGGGCGA TGATGTCCGG TTTTCATGGT TTCTTTAGCG TCGGGGGGAT TGTCGGCGCA
GGCGGTGTCA GCGCCCTGCT GTGGCTTGGT CTCTCCCCGC TAATGGCCAT CCTGACGATG
GTTGCGCTGG TACTGATATT TATGGCAGTG GCGCACAAAC ACCTGCTGCG CACCACGAAC
CAGAATGACG GCGGCCCACT GTTTGTCATC CCACGCGGCT GGGTGATGTT CATTGGTTCA
CTGTGCTTCA TCATGTTCCT GGCCGAAGGT TCCATATTGG ACTGGAGCGC TCTCTTTTTA
ACGGTTGAAC GCAACCTGAG CGGTGCGCAG GCAGGCATGG GCTATGCCGC GTTTTCCGTC
GCGATGACGC TGGGCAGACT GAACGGCGAC CGTATCGTTA ATGCGCTTGG ACGCTACGCG
ATTCTTACCG GCGGCAGCCT CTGTGCCGCA CTCGGTCTGG TGTTAACGAT CAGTATTGAT
AATGCGATCA CCGCGATTCT TGGCTTTGTG ATGGTCGGCA TCGGCGCATC CAATGTGGTG
CCGATTCTTT TCAGCGCGGC CGGAAATCAA AAGATCATGC CGCCCAATCT GGCCATCGCC
TCGATTACAA CCGTGGGCTA CGCTGGTATT CTGATCGGCC CGACCATTCT CGGCTTTATT
GCACAGTTCA GCAATTTGGC TACCGCATTC GGGTTTGTCG CACTGTTGTT GCTGGGCGTC
AGCGCCAGTG CGCGTGCCGT CATCCGCTAA
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| Protein sequence | MSTTLNSNPL CVNQPLPGKK AQTATRIVFF VAGFAMASWA PLVPFVKTRL AISDASLGML
LLSLGIGSLL AMPLTGFLTS KLGCRSVILL ASALLCLILP ALTQAGTLPV MAITLLFFGA
SIGMIDVAMN IQAVIVERAS GRAMMSGFHG FFSVGGIVGA GGVSALLWLG LSPLMAILTM
VALVLIFMAV AHKHLLRTTN QNDGGPLFVI PRGWVMFIGS LCFIMFLAEG SILDWSALFL
TVERNLSGAQ AGMGYAAFSV AMTLGRLNGD RIVNALGRYA ILTGGSLCAA LGLVLTISID
NAITAILGFV MVGIGASNVV PILFSAAGNQ KIMPPNLAIA SITTVGYAGI LIGPTILGFI
AQFSNLATAF GFVALLLLGV SASARAVIR
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