Gene PC1_1085 details

Gene Information

• Locus tag: PC1_1085
• ID: 8132014
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1263543
• End bp: 1265552
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 644864368
• Product: coagulation factor 5/8 type domain protein
• Protein accession: YP_003016670
• Protein GI: 253687480

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.185669
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGACA TCAATATTGA AATTAATGTT TGTGATAGTA CAGGTAAAGC AACATGTACC 
GTTCATCCCC CTGTTTGCTG CCATTCAGAT AATGGCGGCG GGCAAGAGCC TGGCGTTACC 
GGGGTTGCCT CCGTATTCGG ACGGACTGGC GTTGTCACTG CACAATCAGG CGACTATACG 
GCCGATCAAA TTACTGAAAC GGCCACCAGA AAATTTGCTA CGCCGGATGA AAAAGCGGTC 
TGGAATACAA AGCAGGATGC ATTAATTTCT GGCACCACTA TTCGCACGGT CTTTGGTCAG 
TCGCTGCTGG GCAGCGGTGA TGTTTCACCA ACGCCAGCGC AAATGGGGGC TGCTGCGATT 
GGGCACACAC ATACTACAGC GGACATCACC GACTACACAT CAAAAACAAA ACAGCTTATC 
CATTCCTCGC TGGAGGCTGG GGCGGGCGTC ACGCTGAGCT ATAACCCGGT GAATGAGAAA 
ACCATTATCA GCGCTGCAGG TGGTGGTTCC GGTAGTGGTG GTTCTGGCTA TATCGTTGCC 
GATCGTCAGG GCGCAACGGC AGGGCAAAAT CACGCGTTCA GCATTAGCCC ACAAAGCACG 
TTTAATCTCG CGGCGTACGC GCTGAAAGAA GAAGCCGGTG CAGCAAACCA AACTTATGTC 
GTTGATGACT TTAATGCATC AAGTAAAATT AACTATGACA CAACGAATGA TGTTGTTTTT 
GATGGTAAAT TGCACGAAGT TAATGGCGTG TATTCAGAAG TGTTAGAGCA AAGCGGGGGC 
TTTTATAATT CAGAAATAAA AAATGGGTAT CATTCTATCG ATATCAGTGT TGTCAATGAT 
TCAATCGTCC CCAACATGAC ATCTGATAAC ATTCCGACTG GATATATCGC AAGTGCTAGT 
AGCTATAATA CGGCAGCGTA TAATGCATAT TACAGCTTTG ATGGTGTATC TGAGACAAAT 
CAGAAAGCAT GGATTTCTAA TGCTCGGCCG ACGGAACAAG CGCCACAATG GCTGCGTATA 
GATTTACCCA ATAAGCTCCC GGTTTCTGGA TTTGCTATAT TTTCCAGGTA CATTGATTCA 
TACGGAAATA CTGTGGCTTC AGCCAGAGAT TTCATTCTAC AAGGTAGTGA TGATAGCGTT 
GATTGGCATG ACCTACATAA GGTAACGAAT GATACTAGAA ATGACACTCG AGTGATTAAG 
TCATTTAAAC TGGATGAAAC TGCTGTATAT CAACATTACA GATTACTTAT CACAGGTGTT 
AATGGTACTC AAAATTTTGT TGTCATTGCA GAACTGAAGT TATATCCACC CGAAAGTAAA 
TTTGTCATGC GCTACGCTGA TGGATTTTAC ACTATAGTAA ATGGATCACT TAGTAAAATA 
ACGGATACTG TTACACCTGA GCTAATTGAA AACATTGGGG TTTCATCCGC CTCTCTTACT 
GGAAAATATG CTCAGGATGT AATGATTGTA AGTAATGAAA GTGCATTAAT TAAATATGTA 
TATAAGTCAC AGCCTCAAAT CGTTGTCCAG AAATCACTGT TGCGTGCTAC TGTATGGCCT 
CAAATTAATT CCGCCACGTT AACAGCAACA CAGACGGGCA ACGGCAAAGT CCGTGTTGCT 
GTGACGCGGG ACTTGGTGAA CTGGCATGTC TTGCGCAACG GGGCGTGGGT TGATGTTGGA 
GCGCTGTCAG CCGATACGGC AGGGGCTACG ACGTTGATTG CTGACGGTAT GACGCCAACT 
GAACTCGGCG CTATTACGAC AGCACAGTGG ACGCAACTGT TTGCATCCAG TAACGGTGTA 
CCGGATTCGC TTGCCTTTGC CTTCGCGCTT GATATCACCG ATCCAACGGC CGATGTCGCG 
ACCATTGACC GACTGGTGCT GAACGTCAAC GATGCGTCCA GTTGGAAACT GCAGTCCCCT 
GCGGAAGTGG AAATCCGCTG GCGCACGGAC AGCGTGACAT TCCGCACCGT AACGGCAGGC 
AATTACAAAC TGGCGTATCA GGTTCCGTAA 

 

Protein sequence

MKDINIEINV CDSTGKATCT VHPPVCCHSD NGGGQEPGVT GVASVFGRTG VVTAQSGDYT 
ADQITETATR KFATPDEKAV WNTKQDALIS GTTIRTVFGQ SLLGSGDVSP TPAQMGAAAI 
GHTHTTADIT DYTSKTKQLI HSSLEAGAGV TLSYNPVNEK TIISAAGGGS GSGGSGYIVA 
DRQGATAGQN HAFSISPQST FNLAAYALKE EAGAANQTYV VDDFNASSKI NYDTTNDVVF 
DGKLHEVNGV YSEVLEQSGG FYNSEIKNGY HSIDISVVND SIVPNMTSDN IPTGYIASAS 
SYNTAAYNAY YSFDGVSETN QKAWISNARP TEQAPQWLRI DLPNKLPVSG FAIFSRYIDS 
YGNTVASARD FILQGSDDSV DWHDLHKVTN DTRNDTRVIK SFKLDETAVY QHYRLLITGV 
NGTQNFVVIA ELKLYPPESK FVMRYADGFY TIVNGSLSKI TDTVTPELIE NIGVSSASLT 
GKYAQDVMIV SNESALIKYV YKSQPQIVVQ KSLLRATVWP QINSATLTAT QTGNGKVRVA 
VTRDLVNWHV LRNGAWVDVG ALSADTAGAT TLIADGMTPT ELGAITTAQW TQLFASSNGV 
PDSLAFAFAL DITDPTADVA TIDRLVLNVN DASSWKLQSP AEVEIRWRTD SVTFRTVTAG 
NYKLAYQVP