Gene PC1_1078 details

Gene Information

• Locus tag: PC1_1078
• Symbol: recR
• ID: 8132007
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1252122
• End bp: 1252727
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644864361
• Product: recombination protein RecR
• Protein accession: YP_003016663
• Protein GI: 253687473
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00501486
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGACCA GTCCGCTTCT TGAATCATTG ATGGAAGCGC TGCGCTGCCT GCCGGGCGTT 
GGGCCCAAAT CGGCACAGCG CATGGCGTTT CAATTGCTGC AACGTAACCG CAGTGGCGGT 
ATGCGTTTGG CACAGGCGTT GACGCGGGCG ATGTCCGAAA TCGGCCACTG TAGCGATTGC 
CGGACATTCA CTGAACAGGA CGTTTGTGCG ATTTGTTCGA ATCCGCGCCG CCAGCAAAAT 
GGGCAGATTT GCGTGGTGGA AAGCCCGGCT GATATTCATG CTATTGAACA GACGGGGCAG 
TTTGCCGGTC GTTACTTTGT GTTGATGGGG CATTTGTCGC CGCTGGATGG CATTGGCCCG 
GATGATATCG GTTTGGGGCG CCTGGAAGAG CGCCTGCAAG TGGAATCGAT AAGCGAAGTG 
ATTCTGGCAA CCAACCCGAC GGTAGAAGGC GATGCCACAG CGAACTATAT TGCTGAGCTG 
TGTGCGCAAC ACGGCGTGAT GGCTAGCCGC ATTGCCCACG GTGTTCCCGT TGGCGGTGAG 
CTGGAAATGG TCGATGGCAC CACGCTGTCC CATTCACTCG CAGGGCGCCA GCCTTTCCGG 
TTTTAA 

 

Protein sequence

MQTSPLLESL MEALRCLPGV GPKSAQRMAF QLLQRNRSGG MRLAQALTRA MSEIGHCSDC 
RTFTEQDVCA ICSNPRRQQN GQICVVESPA DIHAIEQTGQ FAGRYFVLMG HLSPLDGIGP 
DDIGLGRLEE RLQVESISEV ILATNPTVEG DATANYIAEL CAQHGVMASR IAHGVPVGGE 
LEMVDGTTLS HSLAGRQPFR F