Gene PC1_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1074 
Symbol 
ID8132003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1248454 
End bp1248849 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content51% 
IMG OID644864357 
Producthypothetical protein 
Protein accessionYP_003016659 
Protein GI253687469 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00236568 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCGCG TGTTGTTGAT TATATTGGGG TGGGTTTCCG TTGTGCTGGC AACGTTGGGC 
GTCGTGTTAC CTTTATTGCC AACTACGCCT TTCTTGTTAC TGGCCGCCTG GTGTTTTGCC
CGCTCATCCC CGCGTTTCCA TGACTGGCTA CTGTACCGTT CGTGGTTTGG CAGCTACTTG
CGCCATTGGC AGCAACATCG GGCACTGCCG CCGGGGGCAA AATGGAAGGC AGTCACCATG
ATTCTGTTAA CGTTTGCGCT TTCGCTCTGG CTGGTTAAGC TGGTTTGGGT CAGGATTTTG
CTATTGGTCA TTTTGGCTAT TTTGTTGACC TTTATGCTTC GTTTACCCGT GCTTGATCCA
GAGCAACAAA CGCAGGGCGC GAATCCGAAA AGATAG
 
Protein sequence
MYRVLLIILG WVSVVLATLG VVLPLLPTTP FLLLAAWCFA RSSPRFHDWL LYRSWFGSYL 
RHWQQHRALP PGAKWKAVTM ILLTFALSLW LVKLVWVRIL LLVILAILLT FMLRLPVLDP
EQQTQGANPK R