Gene PC1_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1071 
Symbol 
ID8132000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1246814 
End bp1247455 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content47% 
IMG OID644864354 
ProductDNA-binding transcriptional repressor AcrR 
Protein accessionYP_003016656 
Protein GI253687466 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0117133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGAA AAACCAAAAA ACAGGCTCAG GAAACCCGAC AACAGATACT GGATACCGCG 
TTAAGAGTGT TCTCTGAGCA TGGTGTGTCT GCGACTTCAT TGTCCGACAT TGCGACTGCT 
GCTGGTGTGA CCCGCGGTGC TATTTATTGG CACTTTAAGA ACAAGGCCGA AATTTTCGAT 
GAGATCTGGG CGCTGGCAGA GTCGAAAATC AGTGAGTTTG AAATAGAGTA TCAGACAAAA 
TTCCCTGATA ATCCACTCCG CGTGATGCGT GAATTATTGA TTTATATGCT GCGTTTAACA 
GTTAGTGATA CTCACTGGCG ATCCATTATG GAGATCGCTT TTCACAAATG TGAGTTTGTC 
GGTGAAATGT TGCAATCGTA TAATGCGCGC AAAGAGCTTT ATCTTTCCTG CTATGTCGAT 
ATTGAAGAAA ACCTGATTGA GTGTATTCGT CTGGGCATGT TGCCGACGGA CATTCATTCC 
CGCCGTGCTG CGATTGCACT GCGTGCCTAT TTTTCCGGTG TGATGGAAAA CTGGCTATTT 
ATGCCGGAAA GTTTCGATCT CGATCAGGAA GCCCCGGCGC TGGTGGATGC CTTTATCGAT 
ATGCTGCATT TTAGCCCGGC GCTACGTAAA CCCGCTGAGT AA
 
Protein sequence
MARKTKKQAQ ETRQQILDTA LRVFSEHGVS ATSLSDIATA AGVTRGAIYW HFKNKAEIFD 
EIWALAESKI SEFEIEYQTK FPDNPLRVMR ELLIYMLRLT VSDTHWRSIM EIAFHKCEFV 
GEMLQSYNAR KELYLSCYVD IEENLIECIR LGMLPTDIHS RRAAIALRAY FSGVMENWLF 
MPESFDLDQE APALVDAFID MLHFSPALRK PAE