Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1068 |
Symbol | rpmE2 |
ID | 8131997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1241815 |
End bp | 1242063 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644864351 |
Product | 50S ribosomal protein L31 type B |
Protein accession | YP_003016653 |
Protein GI | 253687463 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0254] Ribosomal protein L31 |
TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.788899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAG GTATTCATCC TGACTACCGC ACGGTGGTAT TTCACGATAC CAGCGCAGAT GTCTATTACA GGACGGGCTC AACAATTAAA ACCGATCGAA CCATTGAACT GGAGGGTACC AGCTACCCTT ACGTCACCAT TGACGTTTCT TCGGCATCGC ATCCCTATTA CACCGGGAAG CAAAAAGAAT ATTCCAAAGA AGGCAGCACA GCGCGCTTCC AGCAGCGCTT TGGGAACTTC TTCAAGTAA
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Protein sequence | MKAGIHPDYR TVVFHDTSAD VYYRTGSTIK TDRTIELEGT SYPYVTIDVS SASHPYYTGK QKEYSKEGST ARFQQRFGNF FK
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