Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1057 |
Symbol | |
ID | 8131986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1231436 |
End bp | 1231897 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644864340 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_003016642 |
Protein GI | 253687452 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.420943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGATA AAATTGATCG CACCCTGTTG AATATGTTGC AACAGGATTG CACGCTTTCG CTACAGACAC TGGCCGATGC GGTTAACTTG ACCTCTACGC CGTGTTGGAA ACGCCTGAAA CGTCTGGAAG AAGAAGGGAT TATCCGGGCT CGGGTGGCGC TGCTGGATAA TGAGCGTCTG GGATTAGGAC TGACGGCGTT TGTCTTATTG AAGACGCAGC AGCACAACCG CGACTGGTAT CAGACCTTCA CCCGCGTGGT GTCCGACATG CCGGAAGTGT TGGCTTTTTA TCGTATGGCC GGTGAATACG ATTACCTGAT GCAGGTTCAG GTCGCTGATA TGAAAAGCTA TGATAATTTC TATAAACGGT TGGTGAATGG TATTCCTGGG CTGGTCGATG TAACATCTAG CTTTGCTATG GAACGAATCA AACATACCAC GGCATTGCCC TTATCCCTGT GA
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Protein sequence | MLDKIDRTLL NMLQQDCTLS LQTLADAVNL TSTPCWKRLK RLEEEGIIRA RVALLDNERL GLGLTAFVLL KTQQHNRDWY QTFTRVVSDM PEVLAFYRMA GEYDYLMQVQ VADMKSYDNF YKRLVNGIPG LVDVTSSFAM ERIKHTTALP LSL
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