Gene PC1_1057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1057 
Symbol 
ID8131986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1231436 
End bp1231897 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content49% 
IMG OID644864340 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003016642 
Protein GI253687452 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.420943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGATA AAATTGATCG CACCCTGTTG AATATGTTGC AACAGGATTG CACGCTTTCG 
CTACAGACAC TGGCCGATGC GGTTAACTTG ACCTCTACGC CGTGTTGGAA ACGCCTGAAA
CGTCTGGAAG AAGAAGGGAT TATCCGGGCT CGGGTGGCGC TGCTGGATAA TGAGCGTCTG
GGATTAGGAC TGACGGCGTT TGTCTTATTG AAGACGCAGC AGCACAACCG CGACTGGTAT
CAGACCTTCA CCCGCGTGGT GTCCGACATG CCGGAAGTGT TGGCTTTTTA TCGTATGGCC
GGTGAATACG ATTACCTGAT GCAGGTTCAG GTCGCTGATA TGAAAAGCTA TGATAATTTC
TATAAACGGT TGGTGAATGG TATTCCTGGG CTGGTCGATG TAACATCTAG CTTTGCTATG
GAACGAATCA AACATACCAC GGCATTGCCC TTATCCCTGT GA
 
Protein sequence
MLDKIDRTLL NMLQQDCTLS LQTLADAVNL TSTPCWKRLK RLEEEGIIRA RVALLDNERL 
GLGLTAFVLL KTQQHNRDWY QTFTRVVSDM PEVLAFYRMA GEYDYLMQVQ VADMKSYDNF
YKRLVNGIPG LVDVTSSFAM ERIKHTTALP LSL