| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1048 |
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| Symbol | clpP |
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| ID | 8131977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1220755 |
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| End bp | 1221378 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644864331 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_003016633 |
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| Protein GI | 253687443 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000032499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCATACA GTGGCGAACA AGAAAGACAA GCACCTCATA TGGCGTTAGT GCCGATGGTG
GTTGAACAGA CCTCGCGTGG GGAACGTTCT TACGATATCT ATTCCCGTCT GCTAAAAGAA
CGGATAATCT TCCTGACTGG TCAGGTTGAA GATCATATGG CGAATCTGGT TGTGGCACAG
ATGCTGTTTC TGGAAGCCGA AAACCCAGAA AAAGACATTT ATCTGTACAT TAACTCTCCT
GGTGGCGTCA TCACTGCCGG TATGTCCATT TACGACACCA TGCAGTTTAT CAAGCCAGAT
GTCAGCACGA TCTGTATGGG ACAGGCTTGC TCAATGGGTG CGTTCCTGTT GACGGCGGGT
GCCAAAGGCA AACGTATTTG CCTGCCTAAC TCGCGCGTTA TGATTCACCA GCCGTTGGGC
GGTTTCCAGG GGCAGGCTAC GGATATTGAA ATCCATGCCA AAGAAATTTT GAAAGTGAAA
GCCAAAATGA ATGAGCTGAT GGCGAAACAT ACGGGTCAGC CTCTTGAAGC GATAGAGAGA
GACACCGAGC GCGATCGTTT CCTCTCTGCC AGTGAGGCAG TAGACTACGG CTTGGTAGAC
TCCGTATTCA CTAACCGCGG GTAA
|
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| Protein sequence | MSYSGEQERQ APHMALVPMV VEQTSRGERS YDIYSRLLKE RIIFLTGQVE DHMANLVVAQ
MLFLEAENPE KDIYLYINSP GGVITAGMSI YDTMQFIKPD VSTICMGQAC SMGAFLLTAG
AKGKRICLPN SRVMIHQPLG GFQGQATDIE IHAKEILKVK AKMNELMAKH TGQPLEAIER
DTERDRFLSA SEAVDYGLVD SVFTNRG
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